Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E01
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14973-1|AAA85661.1|   56|Homo sapiens ribosomal protein S29 pro...    62   2e-09
L31610-1|AAB27426.1|   56|Homo sapiens protein ( Homo sapiens (c...    62   2e-09
BC035313-1|AAH35313.1|   56|Homo sapiens ribosomal protein S29 p...    62   2e-09
BC032813-1|AAH32813.1|   56|Homo sapiens ribosomal protein S29 p...    62   2e-09
AB061847-1|BAB79485.1|   56|Homo sapiens ribosomal protein S29 p...    62   2e-09
AB007165-1|BAA25827.1|   26|Homo sapiens ribosomal protein S29 p...    45   4e-04
BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.    33   1.7  

>U14973-1|AAA85661.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 180 SCRSCSNRXGLIRKYGLNXCXXCFREXAHDIGFKKL 287
           SCR CSNR GLIRKYGLN C  CFR+ A DIGF KL
Sbjct: 20  SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKL 55


>L31610-1|AAB27426.1|   56|Homo sapiens protein ( Homo sapiens
           (clone cori-1cl5) S29 ribosomal protein mRNA, complete
           cds. ).
          Length = 56

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 180 SCRSCSNRXGLIRKYGLNXCXXCFREXAHDIGFKKL 287
           SCR CSNR GLIRKYGLN C  CFR+ A DIGF KL
Sbjct: 20  SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKL 55


>BC035313-1|AAH35313.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 180 SCRSCSNRXGLIRKYGLNXCXXCFREXAHDIGFKKL 287
           SCR CSNR GLIRKYGLN C  CFR+ A DIGF KL
Sbjct: 20  SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKL 55


>BC032813-1|AAH32813.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 180 SCRSCSNRXGLIRKYGLNXCXXCFREXAHDIGFKKL 287
           SCR CSNR GLIRKYGLN C  CFR+ A DIGF KL
Sbjct: 20  SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKL 55


>AB061847-1|BAB79485.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +3

Query: 180 SCRSCSNRXGLIRKYGLNXCXXCFREXAHDIGFKKL 287
           SCR CSNR GLIRKYGLN C  CFR+ A DIGF KL
Sbjct: 20  SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKL 55


>AB007165-1|BAA25827.1|   26|Homo sapiens ribosomal protein S29
           protein.
          Length = 26

 Score = 44.8 bits (101), Expect = 4e-04
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +3

Query: 207 GLIRKYGLNXCXXCFREXAHDIGFKK 284
           GLIRKYGLN C  CFR+ A DIGF K
Sbjct: 1   GLIRKYGLNMCRQCFRQYAKDIGFIK 26


>BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 732 SPPLXGGTXVIPPLSGXPPETXCXPXAPP 818
           +PP    T   PP S  PPET   P  PP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPP 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,459,843
Number of Sequences: 237096
Number of extensions: 1003930
Number of successful extensions: 1544
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)