Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_D23
         (1173 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    29   6.3  
U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (gr...    29   6.3  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   6.3  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   6.3  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    29   6.3  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    29   6.3  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    29   6.3  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    25   8.4  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +3

Query: 498 TXPPXTXXCRCSPXXXDGPTPMDRPXHTRCEXXPRXPLVXXPAHXPPRSPQRTXPDR 668
           T PP +   R  P     P+P  RP  T     PR P    P+  PP  P+    DR
Sbjct: 149 TPPPRSPPPRRPPMTP--PSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDR 203


>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical protein
            Y48E1B.1 protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 354  PPAPPPPPPPPPPPPP 369


>U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (grd
            related) protein 9 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 134  PPPPPSPPPPPPPPPP 149


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
            (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PPH   PPP  PP PP
Sbjct: 138  PPHYPPPPPHYPPPPP 153


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
            related) protein 4 protein.
          Length = 210

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 57   PPPPMCPPPPPPPPPP 72



 Score = 28.7 bits (61), Expect = 8.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 64   PPPPPPPPPMCPPPPP 79


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical protein
            R144.4a protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 2    PPPPPPPPPPPPPPPP 17


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical protein
            R144.4b protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 2    PPPPPPPPPPPPPPPP 17


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
            protein ZC123.1 protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 1124 PPHPXXPPPXNPPXPP 1171
            PP P  PPP  PP PP
Sbjct: 135  PPTPAAPPPPPPPPPP 150


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 24.6 bits (51), Expect(2) = 8.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 1081 PXPPPTPXPPT 1113
            P PPP P PPT
Sbjct: 1354 PVPPPPPPPPT 1364



 Score = 22.2 bits (45), Expect(2) = 8.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 1075 PXPXPPPTPXP 1107
            P P PPP P P
Sbjct: 1338 PPPPPPPPPPP 1348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,961,384
Number of Sequences: 27780
Number of extensions: 115489
Number of successful extensions: 1162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3203378606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)