Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D22
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 129 2e-29
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 129 2e-29
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 129 2e-29
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 129 2e-29
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 129 2e-29
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 128 3e-29
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 31 5.6
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 31 5.6
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 31 5.6
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 31 5.6
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 31 5.6
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 31 5.6
AY367062-1|AAQ67702.1| 138|Homo sapiens E-selectin protein. 31 5.6
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 31 5.6
AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial... 31 5.6
AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial... 31 5.6
AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial... 31 5.6
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 31 5.6
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 31 5.6
AJ347228-1|CAC87177.1| 80|Homo sapiens immunoglobulin heavy ch... 30 9.7
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 129 bits (311), Expect = 2e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +3
Query: 180 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 359
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 360 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 102 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 129 bits (311), Expect = 2e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +3
Query: 180 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 359
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 360 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 102 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 129 bits (311), Expect = 2e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +3
Query: 180 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 359
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 360 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 102 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 129 bits (311), Expect = 2e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +3
Query: 180 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 359
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 360 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 102 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 129 bits (311), Expect = 2e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Frame = +3
Query: 180 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 359
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 360 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 96
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 102 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 128 bits (308), Expect = 3e-29
Identities = 57/93 (61%), Positives = 72/93 (77%)
Frame = +3
Query: 189 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 368
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 369 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 467
+Y+R GV ++TKI+GGR+RNGV PSHF R S
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 108
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 485 RALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 583
R LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 114 RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 146
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AY367062-1|AAQ67702.1| 138|Homo sapiens E-selectin protein.
Length = 138
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 74 PVFGTVCKFACPEGWTLN 91
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 484
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 384 PVFGTVCKFACPEGWTLN 401
>AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 447 PVFGTVCKFACPEGWTLN 464
>AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 485
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 385 PVFGTVCKFACPEGWTLN 402
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 447 PVFGTVCKFACPEGWTLN 464
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 63 PTQGKVCNFACPHGYSLN 116
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AJ347228-1|CAC87177.1| 80|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 80
Score = 30.3 bits (65), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 441 TPSHFCRSSGQYCTQGLCNRW 503
T ++C +S QYCT G+CN W
Sbjct: 60 TAVYYC-ASRQYCTNGVCNPW 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,007,626
Number of Sequences: 237096
Number of extensions: 2030686
Number of successful extensions: 3943
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3943
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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