Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D21
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 34 0.17
06_01_0486 - 3455030-3455770 32 0.53
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 0.93
03_01_0515 - 3864796-3865425 31 1.6
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 3.8
04_04_1125 + 31085106-31085714 29 3.8
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 6.6
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.7
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 8.7
01_02_0007 + 10132380-10133201 28 8.7
01_01_0070 - 542603-542686,542803-543441 28 8.7
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +1
Query: 667 PCRLPXTCPPFSLRXXXA-PSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPX 843
P P PP+ A P P P SP PP P P P P P P
Sbjct: 257 PPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFP-QLPPLPHFPPLPS 315
Query: 844 LXXXPXXXPXXXPXP 888
P P P P
Sbjct: 316 FYPSPPPPPPPPPPP 330
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/87 (27%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +3
Query: 627 FPLXXPLXRSPVPTLPLTXYLSXFLPSXXXGPFSXXXPXXISXXXX--SXPPXPXXXPXP 800
FPL P +P P P F P P P PP P P P
Sbjct: 262 FPLP-PWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSP 320
Query: 801 PXXPXXXPXPXXXXPXXXPXXXPXXXP 881
P P P P P P P P
Sbjct: 321 PPPPPPPPPPPPSFPWPFPPLAPLFPP 347
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/77 (25%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +1
Query: 667 PCRLPXTCPPFSLRXXXAPSPXXXPXXSPXX---VXXXPPXXXXXPXPXXXXPXPXXPXX 837
P P + PP + P P P P PP P P P P P
Sbjct: 248 PFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPL 307
Query: 838 PXLXXXPXXXPXXXPXP 888
P P P P P
Sbjct: 308 PHFPPLPSFYPSPPPPP 324
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 3/90 (3%)
Frame = +1
Query: 628 FPXXLPSCALLFXPC-RLPXTCPPFSLRXXXAPSPXXXPXXSPXX--VXXXPPXXXXXPX 798
FP LP P P P FS P P P P + PP P
Sbjct: 260 FPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPS 319
Query: 799 PXXXXPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P P
Sbjct: 320 PPPPPPPPPPPPPSFPWPFPPLAPLFPPYP 349
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = +1
Query: 667 PCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXL 846
P LP PP +P P P P PP P P P P
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPP-- 294
Query: 847 XXXPXXXPXXXPXP 888
P P P P
Sbjct: 295 PAFPFPFPQLPPLP 308
>06_01_0486 - 3455030-3455770
Length = 246
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/86 (24%), Positives = 23/86 (26%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P P C P P PP + +P P P P PP P
Sbjct: 66 PPPSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVP 125
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 126 PPTPPSPPPYVPPPTPPSPPPYVPPP 151
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/108 (24%), Positives = 33/108 (30%)
Frame = +3
Query: 546 RPPDXHHXNRRSSXXWRNPTGLXXYXXFPLXXPLXRSPVPTLPLTXYLSXFLPSXXXGPF 725
+PP+ HH ++ P+ P P R P PT P ++P P
Sbjct: 56 KPPEHHHHHKPP------PSPRCPSCHPPYTPPTPR-PPPTPPYVPSPPPYVPPYIPPPT 108
Query: 726 SXXXPXXISXXXXSXPPXPXXXPXPPXXPXXXPXPXXXXPXXXPXXXP 869
P I P P PP P P P P P P
Sbjct: 109 PPYVPPYIPPPTPPYVPPPTPPSPPPYVP--PPTPPSPPPYVPPPSPP 154
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +1
Query: 691 PPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXPXXXP 870
PP L P P P P + PP P P P P P L P P
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPP-LPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
Query: 871 XXXPXP 888
P P
Sbjct: 1197 APPPLP 1202
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFS-LRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXX 807
P P C P P T PP L P P P S PP P P
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIP 1209
Query: 808 XXPXPXXP 831
P P P
Sbjct: 1210 PPPVPSSP 1217
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/76 (26%), Positives = 23/76 (30%)
Frame = +3
Query: 630 PLXXPLXRSPVPTLPLTXYLSXFLPSXXXGPFSXXXPXXISXXXXSXPPXPXXXPXPPXX 809
P PL P P + LP P + P +S PP P PP
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPP-PATPPPPPPLSPSLPPPPPPPPLPSGPPPQ 1195
Query: 810 PXXXPXPXXXXPXXXP 857
P P P P P
Sbjct: 1196 PAPPPLPIQPPPIPPP 1211
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = +3
Query: 630 PLXXPLXRSPVPTLPLTXYLSXFLPSXXXGPFSXXXPXXISXXXXSXPPXPXXXPXPPXX 809
P P SP P P S P GP P S S PP P P PP
Sbjct: 39 PPSPPTEASPPPLAPPPSVTSS-PPPPAAGPLMPPPPPPPSVTS-SPPPPPLPPPPPPPA 96
Query: 810 PXXXPXPXXXXPXXXPXXXPXXXP 881
P P P P P
Sbjct: 97 ASPPPPPPSPPPPSPVKSSPPPPP 120
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/55 (27%), Positives = 17/55 (30%)
Frame = +1
Query: 676 LPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXP 840
+P PP S+ P P P P PP P P P P P
Sbjct: 70 MPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 771 PPXPXXXPXPPXXPXXXPXPXXXXPXXXPXXXP 869
PP P P PP P P P P P P
Sbjct: 426 PPPPLPPPPPPPPPPPPPLPPNMPPPLPPPPEP 458
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXP-XXPXXPXLXXX 855
P T PP P+P +P PP P P P P P P
Sbjct: 35 PTTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPAT 94
Query: 856 PXXXPXXXPXP 888
P P P P
Sbjct: 95 PTTPPTPAPAP 105
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P TC P S AP P P P PP P P P + P
Sbjct: 42 PTTCYPVSSAAPTAPPPKPSPTPPP----ASPPPAPTPPQTRPPSPPPQQQQPRPVSPPP 97
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 98 VAEPYYWPKP 107
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 304 NESAN---ARGEAVCVLGALPLPRSLTRCAR 387
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/76 (26%), Positives = 24/76 (31%)
Frame = +3
Query: 630 PLXXPLXRSPVPTLPLTXYLSXFLPSXXXGPFSXXXPXXISXXXXSXPPXPXXXPXPPXX 809
P+ P+ P+P L LS P P + S PP P P PP
Sbjct: 553 PMQPPVMPPPIPKL-----LS---PPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPP 604
Query: 810 PXXXPXPXXXXPXXXP 857
P P P P
Sbjct: 605 KSTGPGPPRPPPPAMP 620
>01_02_0007 + 10132380-10133201
Length = 273
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/87 (27%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P P L P LP P + P P P P PP P P
Sbjct: 90 PQPQPQPLPLPGPQPLPQPGPQPNPNPQPLPQPNPNPQPLPQPDPNAPPLPLPQPNPNNP 149
Query: 811 XPXP-XXPXXPXLXXXPXXXPXXXPXP 888
P P P P L P P P P
Sbjct: 150 QPLPQPDPNAPSL-PLPQPDPNAPPLP 175
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +1
Query: 721 PSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXPXXXPXXXPXP 888
P+P P +P P P P P P P P + P P P P
Sbjct: 61 PTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTP--PPVTPPPVTPPPVSPPP 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,720,800
Number of Sequences: 37544
Number of extensions: 310939
Number of successful extensions: 1400
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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