Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D21
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 35 0.34
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 35 0.34
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 35 0.34
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 35 0.34
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 35 0.34
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 35 0.34
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 35 0.34
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 35 0.34
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 35 0.34
U48869-1|AAB05896.1| 316|Homo sapiens cdk-inhibitor p57/KIP2 pr... 32 3.2
U22398-1|AAA85095.1| 316|Homo sapiens p57KIP2 protein. 32 3.2
D64137-2|BAA11015.1| 305|Homo sapiens p57KIP2 protein. 32 3.2
D64137-1|BAA11014.1| 316|Homo sapiens p57KIP2 protein. 32 3.2
BC067842-1|AAH67842.1| 316|Homo sapiens cyclin-dependent kinase... 32 3.2
BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein. 31 7.4
AK131315-1|BAD18478.1| 134|Homo sapiens protein ( Homo sapiens ... 31 7.4
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 187 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 246
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 247 LNPPPVAPLP 256
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 35.1 bits (77), Expect = 0.34
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 679 PXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXLXXXP 858
P PP P P P P V PP P P P P P P
Sbjct: 207 PPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPP 266
Query: 859 XXXPXXXPXP 888
P P P
Sbjct: 267 LNPPPVAPLP 276
>U48869-1|AAB05896.1| 316|Homo sapiens cdk-inhibitor p57/KIP2
protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P LPS + P P P + AP+P P +P V P P P
Sbjct: 133 PEQLPSVPVP-APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAP-AP 190
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 191 APAPVAAPAPAPAPAPAPAPAPAPAP 216
>U22398-1|AAA85095.1| 316|Homo sapiens p57KIP2 protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P LPS + P P P + AP+P P +P V P P P
Sbjct: 133 PEQLPSVPVP-APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAP-AP 190
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 191 APAPVAAPAPAPAPAPAPAPAPAPAP 216
>D64137-2|BAA11015.1| 305|Homo sapiens p57KIP2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P LPS + P P P + AP+P P +P V P P P
Sbjct: 122 PEQLPSVPVP-APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAP-AP 179
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 180 APAPVAAPAPAPAPAPAPAPAPAPAP 205
>D64137-1|BAA11014.1| 316|Homo sapiens p57KIP2 protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P LPS + P P P + AP+P P +P V P P P
Sbjct: 133 PEQLPSVPVP-APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAP-AP 190
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 191 APAPVAAPAPAPAPAPAPAPAPAPAP 216
>BC067842-1|AAH67842.1| 316|Homo sapiens cyclin-dependent kinase
inhibitor 1C (p57, Kip2) protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 631 PXXLPSCALLFXPCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXX 810
P LPS + P P P + AP+P P +P V P P P
Sbjct: 133 PEQLPSVPVP-APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAP-AP 190
Query: 811 XPXPXXPXXPXLXXXPXXXPXXXPXP 888
P P P P P P P
Sbjct: 191 APAPVAAPAPAPAPAPAPAPAPAPAP 216
>BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein.
Length = 407
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/99 (24%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Frame = +3
Query: 597 NPTGLXXYXXFPLXXPLXRSPVP---TLPLTXYLSXFLPSXXXGPFSXXXPXXISXXXXS 767
NP + P+ P+ P+P ++P+ +S + GP P IS
Sbjct: 175 NPGPIPGPNPGPIPGPIS-GPIPGPISVPIPGPISGPISGPNPGPIPGPIPGPISGPNPG 233
Query: 768 XPPXPXXXPXPPXXPXXXPXP-XXXXPXXXPXXXPXXXP 881
P P P P P P P P P P P
Sbjct: 234 PIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIP 272
>AK131315-1|BAD18478.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ16303 fis, clone PROST2019487. ).
Length = 134
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +1
Query: 340 VLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEPKAXKRPXXVXRP 519
+LG LP ++ A + G QLT + ++ +TQ P +RP + P
Sbjct: 45 LLGISNLPALASQVAETTGMSHHTQLTTCNFFDRDRSCHVTQTDLKTP-GLRRPTHLGLP 103
Query: 520 RCWRFSIXSAPLTSITXID 576
+CW + LT ++
Sbjct: 104 KCWDYRCEPLHLTQFVILN 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,607,164
Number of Sequences: 237096
Number of extensions: 1609085
Number of successful extensions: 7852
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6463
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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