Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_D21
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   3.7  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   3.7  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    29   8.6  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/74 (25%), Positives = 21/74 (28%)
 Frame = +1

Query: 667 PCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXL 846
           P   P   P +  R    P+P   P   P      PP     P      P P  P  P  
Sbjct: 302 PPPAPPAGPTYQPRPPAPPAPAPGPTYQPRP--PAPPAPAPGPTYQPRPPSPPAPPAPTY 359

Query: 847 XXXPXXXPXXXPXP 888
              P   P   P P
Sbjct: 360 QPQPPAPPAPAPGP 373


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/74 (25%), Positives = 21/74 (28%)
 Frame = +1

Query: 667 PCRLPXTCPPFSLRXXXAPSPXXXPXXSPXXVXXXPPXXXXXPXPXXXXPXPXXPXXPXL 846
           P   P   P +  R    P+P   P   P      PP     P      P P  P  P  
Sbjct: 302 PPPAPPAGPTYQPRPPAPPAPAPGPTYQPRP--PAPPAPAPGPTYQPRPPSPPAPPAPTY 359

Query: 847 XXXPXXXPXXXPXP 888
              P   P   P P
Sbjct: 360 QPQPPAPPAPAPGP 373


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 307 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 402
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/56 (26%), Positives = 16/56 (28%)
 Frame = +3

Query: 702 PSXXXGPFSXXXPXXISXXXXSXPPXPXXXPXPPXXPXXXPXPXXXXPXXXPXXXP 869
           P    GP     P        + P  P   P PP  P   P P    P   P   P
Sbjct: 212 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGP 267


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/56 (26%), Positives = 16/56 (28%)
 Frame = +3

Query: 702 PSXXXGPFSXXXPXXISXXXXSXPPXPXXXPXPPXXPXXXPXPXXXXPXXXPXXXP 869
           P    GP     P        + P  P   P PP  P   P P    P   P   P
Sbjct: 214 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGP 269


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 307 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 402
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,820,568
Number of Sequences: 53049
Number of extensions: 484668
Number of successful extensions: 1602
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)