Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_D19
         (869 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|...    27   2.6  
SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces pomb...    27   2.6  
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha...    27   4.6  
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ...    26   6.1  
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc...    26   8.0  

>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 348

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 458 LSNYLDAQY-YGSDQY-RHAAAVVQGWYSTPDPPTSGCLPKSAT 583
           LS  +D QY +G  Q+ +H   ++  + S P P  + C P S T
Sbjct: 132 LSEKIDLQYLFGGIQHLKHLEYIILPYLSIPAPMCTECWPSSLT 175


>SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 351

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = -1

Query: 551 EDPVSNTTLERLRRRADTDHSRSTEHQDNLTMVRVKGQSHRILISTAPV---QCQPHESG 381
           E  +SNTT E+ ++    +     EH + L ++   G+    LI   PV   + +P   G
Sbjct: 184 EAQLSNTTREKFKQAMTFNLDALHEHAEKLNLIATYGRHLLNLIDDTPVTPGEARPAYDG 243

Query: 380 FSQFSYDVMAPYIVPLRSWRSAPKKIKISF 291
           + + S  ++      L SW   P +  ++F
Sbjct: 244 Y-ETSRQIVMDAEHALSSW--VPSQPAVNF 270


>SPAC23E2.03c |ste7||meiotic suppressor protein
           Ste7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 569

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 524 QGWYSTPDPPTSGCLPKSATTPTSLVXLHNKYDSRKSXTYVANGT 658
           Q  Y  P   +S   P   +TP+S V L N +DS +S  Y  +GT
Sbjct: 296 QSHYENPLSISSRPSPCCPSTPSSAVTLSNGFDS-QSNAYNNSGT 339


>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 501

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 287 MGKISLFFLALIASSVMALYRVPLHRMKTARTH 385
           MGK+S+ + A IAS+ + ++  P +R      H
Sbjct: 1   MGKLSMLYNAAIASTFVKVFLFPSYRSTDFEVH 33


>SPAC6G9.04 |mug79||meiotically upregulated gene
            Mug79|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1318

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +2

Query: 482  YYGSDQYRHAAAVVQGWYS--TPDPPTSGCLPKSATTP--TSLVXLHNKYDSRKSXTYVA 649
            YYGSD Y H + ++Q + S         G L +         L+ LH    S+K  +YV 
Sbjct: 798  YYGSDDYIH-SPILQVFASCWLKQNSNYGFLNEDIIVKIVLILIDLHKSTYSKKLNSYVV 856

Query: 650  NGTXFAIQYGSGSLSGFLSTDDVXV 724
                F ++Y    L   +S D V +
Sbjct: 857  PMETF-VKYALEKLRPLISPDSVCI 880


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,779,147
Number of Sequences: 5004
Number of extensions: 56284
Number of successful extensions: 146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)