Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D19
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 61 1e-09
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 61 1e-09
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 60 2e-09
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 55 6e-08
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 53 3e-07
11_02_0009 - 7315669-7315686,7316239-7316259,7316425-7316519,731... 43 3e-04
12_01_0940 - 9303549-9303723,9303816-9303893,9304055-9304110,930... 33 0.22
04_02_0002 + 8412568-8412781,8412915-8413015,8413114-8413185,841... 33 0.39
01_05_0710 + 24492337-24493053 31 1.2
07_03_0704 + 20831071-20832381 30 2.1
07_03_0203 + 15138864-15140452,15140629-15140726,15141924-151422... 29 4.8
08_01_0529 + 4589434-4589652,4589897-4589953,4590106-4590237 29 6.4
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953... 28 8.5
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 422 LKYDVTGPSPEPLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSLV 601
LK + P PL +YL+ QYYG + Q + D +S SA S+
Sbjct: 57 LKTGSSDSDPVPLVDYLNTQYYG---VIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIA 113
Query: 602 X-LHNKYDSRKSXTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
LH++Y+S+KS +Y A+G I YGSG++SGF S D+V VG
Sbjct: 114 CYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVG 156
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 419 RLKYDVTGPSPEPLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSL 598
RL+ D G PL NYLD QY+G Q + D +S S S+
Sbjct: 55 RLRADGLGDDIVPLDNYLDTQYFGEIGI---GTPPQNFTVIFDTGSSNLWVPSVKCYFSI 111
Query: 599 VX-LHNKYDSRKSXTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
LH++Y S+ S +Y NG +I YGSGS++GF S D V VG
Sbjct: 112 ACYLHHRYKSKGSSSYKKNGESCSISYGSGSIAGFFSEDSVLVG 155
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 449 PEPLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSLVX-LHNKYDS 625
P L N+L+AQY+G Q + D +S SA SL H KY+S
Sbjct: 128 PLALKNFLNAQYFGEIG---VGCPPQNFTVVFDTGSSNLWVPSAKCVFSLACYFHRKYES 184
Query: 626 RKSXTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
R S TY+ NGT +I YG+GS+ G+ S D V +G
Sbjct: 185 RSSSTYMENGTPASIHYGTGSIHGYYSQDQVTIG 218
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 458 LSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSLVXL-HNKYDSRKS 634
L NY++AQY+G Q + D +S SA S+ H++Y S +S
Sbjct: 77 LKNYMNAQYFGEIG---VGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQS 133
Query: 635 XTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
TY NG AIQYG+GS++GF S D V VG
Sbjct: 134 STYQKNGKPAAIQYGTGSIAGFFSEDSVTVG 164
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = +2
Query: 458 LSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSLVXLHNKYDSRKSX 637
L NYL+AQYYG + + T ++ +P S + H++Y + +S
Sbjct: 90 LKNYLNAQYYGEIAIGTPPQMFTVIFDTGS--SNLWVPSSKCHLSIACYFHSRYKAGQSS 147
Query: 638 TYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
TY NG +I YG+G++SG+ S D V VG
Sbjct: 148 TYKKNGKPASIHYGTGAISGYFSQDSVKVG 177
>11_02_0009 -
7315669-7315686,7316239-7316259,7316425-7316519,
7317445-7317502,7317701-7317792,7318101-7318227
Length = 136
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 611 NKYDSRKSXTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
++Y S + TY NG AIQYG+GS+ GF + D V VG
Sbjct: 79 HRYKSEQPSTYRKNGKPAAIQYGTGSVDGFFNEDSVTVG 117
>12_01_0940 -
9303549-9303723,9303816-9303893,9304055-9304110,
9304687-9304760,9304888-9304892,9304934-9304971,
9308558-9308578,9308764-9308858,9309989-9310115
Length = 222
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 644 VANGTXFAIQYGSGSLSGFLSTDDVXVG 727
+ +G AIQYG+GS+ GF + D V VG
Sbjct: 40 MTDGKPAAIQYGTGSVDGFFNEDSVTVG 67
>04_02_0002 +
8412568-8412781,8412915-8413015,8413114-8413185,
8413267-8413380,8414248-8414269,8414450-8414598,
8415054-8415203,8415369-8415401,8418268-8418474
Length = 353
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 653 GTXFAIQYGSGSLSGFLSTDDVXVG 727
G AIQYG+GS++GF + D V +G
Sbjct: 243 GKPAAIQYGNGSVAGFFNEDSVTIG 267
>01_05_0710 + 24492337-24493053
Length = 238
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 413 LLRLKYDVTGPSPEPLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPT 592
L +++ PSP PL+ L + R AA+VV+ W PD P P SAT
Sbjct: 106 LTAIRHHPLRPSPLPLATPLLGHLLSRRRAREAASVVR-WLCRPDSPQR---PDSATFAV 161
Query: 593 SLVXLHNKYDSRKS 634
++ L D R +
Sbjct: 162 AVAGLCRLEDPRNA 175
>07_03_0704 + 20831071-20832381
Length = 436
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 455 PLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSATTPTSLVXLHN--KYDSR 628
PL + GSD A + P PP P S++T + L + ++
Sbjct: 95 PLLTFSVVADTGSDLIWTQCAPCTKCFQQPAPPFQ---PASSSTFSKLPCTSSFCQFLPN 151
Query: 629 KSXTYVANGTXFAIQYGSGSLSGFLSTDDVXVG 727
T A G + +YGSG +G+L+T+ + VG
Sbjct: 152 SIRTCNATGCVYNYKYGSGYTAGYLATETLKVG 184
>07_03_0203 +
15138864-15140452,15140629-15140726,15141924-15142235,
15142437-15142749,15144025-15146023,15147033-15147068
Length = 1448
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 438 LALHPNHCQIILMLSTTGVISIGTPPQSFKGGIRHRILQPLGAFQKVP 581
L+L P+H +S G+ + TPP+ + + +L P+G F ++P
Sbjct: 280 LSLVPSHSASSKCISCDGLRIVSTPPRLLQ---KLELLMPIGVFSRLP 324
>08_01_0529 + 4589434-4589652,4589897-4589953,4590106-4590237
Length = 135
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 542 VSNTTLERLRRRADTDHSRSTEHQDNLTMVRVKGQSHRILISTAPVQCQ 396
V+ RLRRRA+ D RS E D+ V+ + I T+ +Q +
Sbjct: 56 VAEEKARRLRRRAEKDEKRSEECSDSSAYALVQFKQKVITCCTSRLQAE 104
>02_02_0535 -
11292509-11294679,11294971-11295040,11295268-11295324,
11298629-11298789,11299123-11299156
Length = 830
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 425 KYDVTGPSPEPLSNYLDAQYYGSDQYRHAAAVVQGWYSTPDPPTSGCLPKSA 580
+Y+ T P P P S+++ Y S H++ + P PPTS +P SA
Sbjct: 190 QYNHTEPIPVPKSSFIS--YPPSGAVSHSSPGQPHHMNMPSPPTSFQMPVSA 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,603,797
Number of Sequences: 37544
Number of extensions: 388776
Number of successful extensions: 1008
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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