Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D13
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.042
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.073
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.097
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.29
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.29
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.032
Identities = 25/106 (23%), Positives = 25/106 (23%)
Frame = +3
Query: 576 PPXXXXPPPXRXXPXXXXXXPXPXXPXPXXPXXPXXXXXXXXXXPPPXXXXXXPPPXXXX 755
PP P R P P P P PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA------PPSLPM 441
Query: 756 XXXXXXPXXXXXPXXXPXPXXXPPXXXXXPXXPPPPXXPPPXPXPP 893
P P P P P P P PP P P P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.073
Identities = 24/108 (22%), Positives = 24/108 (22%), Gaps = 2/108 (1%)
Frame = +1
Query: 577 PPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXXPXPPPPXAXXXXPPPXXXX 756
PP P P P P P PPPP PP
Sbjct: 271 PPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG 330
Query: 757 XXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPP--XXPPPP 894
P P P PP PP P PPP
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 700 PXPPPPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPPX 879
P P PP PP P P P P P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 880 XPPPP 894
PP P
Sbjct: 476 PPPAP 480
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +1
Query: 700 PXPP--PPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXP 873
P PP PP A PP P P P P PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 874 PXXPPPP 894
P P P
Sbjct: 478 PAPAPAP 484
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.042
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 3/85 (3%)
Frame = +1
Query: 649 PPXPXPXXXXXXXXXXXPXPPPPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXP 828
P P P PP P PPP P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSI----PPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 829 XXXXXPXPPXP---PPXPPXXPPPP 894
P P PP PP PPPP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/83 (21%), Positives = 18/83 (21%)
Frame = +3
Query: 642 PXXPXPXXPXXPXXXXXXXXXXPPPXXXXXXPPPXXXXXXXXXXPXXXXXPXXXPXPXXX 821
P P P P PPP P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 822 PPXXXXXPXXPPPPXXPPPXPXP 890
P P PP PP P
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAP 210
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.073
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 700 PXPPPPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXP 873
P PPPP P P P P P P P PP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP------PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +3
Query: 792 PXXXPXPXXXPPXXXXXPXXPPPPXX------PPPXPXPP 893
P P P P P PPPP PPP P PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 650 PXPXXPXXPXXXXXXXXPXPPPPXXXXXXPPPXXXXPP 763
P P P P PPPP PPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.68
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
Frame = +1
Query: 805 PXPXXXXPXXXXXPXPPXPPP-----XPPXXPPPP 894
P P P PP PPP PP PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Frame = +3
Query: 792 PXXXPXPXXXPPXXXXXPXXPPPPXX--PPPXPXPP 893
P P P P PP P PPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Frame = +1
Query: 805 PXPXXXXPXXXXXPXPPXPPPX----PPXXPPPP 894
P P P P P PP PP PPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.097
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = -3
Query: 887 GGXXGGXGGGXGGXGXXXXXGXXXXGXGXXXXGXGXXXXXXXXXXXXXGG-GXXXXAXGG 711
GG GG GGG GG G G G GG G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 710 GGXGXXXXXXXXXXXGXGXGGXG 642
G G G G GG G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHG 269
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 774 PXXXXXPXXXPXPXXXPPXXXXXPXXPPPPXXPPPXPXPP 893
P P P P PP P PP P PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP----PSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.68
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 774 PXXXXXPXXXPXPXXXPPXXXXXPXXPPPPXXPPPXPXPP 893
P P P P PP P PPPP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 811 PXXXXPXXXXXPXPPXPP---PXPPXXPPPP 894
P P P PP PP P PP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 810 PXXXPPXXXXXPXXPPPPXXPPPXPXPP 893
P P P PPPP PP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 790 PXXXXPXPXXXXPXXXXXPXPPXPPPXPPXXPPPP 894
P P P P P P PP PPPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/116 (21%), Positives = 25/116 (21%)
Frame = +1
Query: 544 PXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXXPXPPPPXA 723
P P P PP P PP P P PP P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 724 XXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPPXXPPP 891
PP P P P P PP PP PP
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP--VPKPSVGVPPVPPPSTAPP 1218
Score = 29.9 bits (64), Expect = 0.52
Identities = 24/101 (23%), Positives = 24/101 (23%), Gaps = 2/101 (1%)
Frame = +3
Query: 594 PPPXRXXPXXXXXXPXPXXPXPXXPXXPXXXXXXXXXXPPPXXXXXXPPPXXXXXXXXXX 773
P P P P P P P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 774 PXXXXXPXXXPXPXXXPPXXXXXPXXPP--PPXXPPPXPXP 890
P P P P PP PP PP PP P P
Sbjct: 1184 PAAGVPPV--PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.5 bits (63), Expect = 0.68
Identities = 25/115 (21%), Positives = 25/115 (21%)
Frame = +1
Query: 544 PXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXXPXPPPPXA 723
P P P PP P PP P P PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 724 XXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPPXXPP 888
PP P P P P P P PP PP
Sbjct: 1146 SVAAPP------VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.9 bits (59), Expect = 2.1
Identities = 32/142 (22%), Positives = 33/142 (23%), Gaps = 6/142 (4%)
Frame = +1
Query: 487 PLXPXKKXL-TXPXGFLXXXPXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPP--X 657
P P K + T P L P P PP P P P P
Sbjct: 992 PSAPLSKPVSTSPAAPLARVP-PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 658 PXPXXXXXXXXXXXPXPPPPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXX 837
P P P P P P P P P P P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVA 1110
Query: 838 XXPXPP---XPPPXPPXXPPPP 894
P P PP P PP
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPP 1132
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/74 (22%), Positives = 18/74 (24%)
Frame = +1
Query: 520 PXGFLXXXPXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXX 699
P + P P G PP PP P PP P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 700 PXPPPPXAXXXXPP 741
PP A P
Sbjct: 1234 AKAPPVPAPSSEAP 1247
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/117 (20%), Positives = 24/117 (20%)
Frame = +1
Query: 544 PXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXXPXPPPPXA 723
P P P PP PP P P PP P A
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP-A 1173
Query: 724 XXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPPXXPPPP 894
PP P P P P P P PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/119 (20%), Positives = 24/119 (20%), Gaps = 4/119 (3%)
Frame = +1
Query: 544 PXPGXGXXXXXPPXXXPPXXXGXXXXXXXXXPXPXPPXPXPXXXXXXXXXXX----PXPP 711
P P P PP P PP P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 712 PPXAXXXXPPPXXXXXXXXXXXXXPXPXXXXPXPXXXXPXXXXXPXPPXPPPXPPXXPP 888
P PPP P P P P P PP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 826 PXXXXXPXPPXPPPXPPXXPPPP 894
P P PP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Frame = +3
Query: 822 PPXXXXXPXXPP---PPXXPPPXPXP 890
PP P PP PP PPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 825 PXXXXXPXXPPPPXXPPPXPXPP 893
P P PPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 810 PXXXPPXXXXXPXXPPPPXXPPPXP 884
P PP P PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 792 PXXXPXPXXXPPXXXXXPXXPPPPXXPPP 878
P P P PP P PPPP PPP
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPP--PPP 30
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +1
Query: 805 PXPXXXXPXXXXXPXPPXPPPXP 873
P P P PP PPP P
Sbjct: 892 PNDATSLPTIITHPTPPPPPPLP 914
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 850 PPXPPPXPPXXPPP 891
P PPP PP PPP
Sbjct: 942 PAFPPPPPP--PPP 953
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -3
Query: 890 GGGXXGGXGGGXGG-XGXXXXXGXXXXGXGXXXXGXG 783
GGG G GGG GG G G G G G G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 844 PXPPXPPPXPPXXPP 888
P P PPP PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 804 PXPXXXPPXXXXXPXXPPPPXXPPPXPXPP 893
P P PP P PPP P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,190,194
Number of Sequences: 5004
Number of extensions: 39401
Number of successful extensions: 351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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