Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D05
(1029 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 33 0.37
06_03_1326 - 29355467-29355817 33 0.37
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 31 1.1
07_03_0558 + 19461369-19462448 31 1.5
07_03_0560 + 19479597-19480667 31 2.0
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 31 2.0
03_02_0765 + 11000724-11002496 31 2.0
07_01_0516 - 3850252-3852870 30 2.6
03_06_0088 - 31562596-31563096 29 4.5
01_01_0082 + 625198-625719 29 6.0
12_02_1174 - 26696869-26698191 29 7.9
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 7.9
07_03_1751 - 29215074-29216270 29 7.9
04_03_0904 + 20717005-20718087 29 7.9
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 7.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 7.9
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.1 bits (72), Expect = 0.37
Identities = 26/110 (23%), Positives = 30/110 (27%), Gaps = 2/110 (1%)
Frame = +2
Query: 665 GXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXP-KLXXGDFX 841
G P P S+PP P +SPPP P T K P
Sbjct: 635 GHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP 694
Query: 842 XXPXXXXQXXXPPHXXKP-RXQXTFXXGXPPNXPPPXXXGPXXTPPAXXP 988
P PP P + PPP G +PP P
Sbjct: 695 PPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSP 744
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/107 (22%), Positives = 30/107 (28%), Gaps = 2/107 (1%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXP-KLXXGDFXXXP 850
P P +S+PP P +SPPP P + K P P
Sbjct: 605 PSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPP 664
Query: 851 XXXXQXXXPPHXXKP-RXQXTFXXGXPPNXPPPXXXGPXXTPPAXXP 988
PP P + PPP G +PP P
Sbjct: 665 TPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTP 711
>06_03_1326 - 29355467-29355817
Length = 116
Score = 33.1 bits (72), Expect = 0.37
Identities = 24/84 (28%), Positives = 28/84 (33%)
Frame = -2
Query: 977 RGGFXXXRXXGXXGSXAGXRGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRF 798
+GG G G G +G G G G G G +GGGE G +S
Sbjct: 4 KGGGGGGGGKGGGGGGGGGKGGGG-GSGGGGRSGGGGGGGGGKGGGEGGSGKYGGGYSGG 62
Query: 797 XXXGVXGGGXXYXXXGGXGNSXXK 726
G G G GG G K
Sbjct: 63 HAGGGGGAGKSGGYHGGGGGDSMK 86
>02_04_0056 + 19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 911 FXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
F G PP PPP P +PPA P P S P
Sbjct: 48 FPHGPPP--PPPPSPSPSPSPPAGKPTKPHPESTP 80
>07_03_0558 + 19461369-19462448
Length = 359
Score = 31.1 bits (67), Expect = 1.5
Identities = 24/78 (30%), Positives = 25/78 (32%)
Frame = -2
Query: 974 GGFXXXRXXGXXGSXAGXRGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRFX 795
GG G G AG G G G G G G GGG G
Sbjct: 106 GGGLGGGQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGVGGGA 165
Query: 794 XXGVXGGGXXYXXXGGXG 741
GV GGG + GG G
Sbjct: 166 GGGV-GGGGGFGGGGGGG 182
>07_03_0560 + 19479597-19480667
Length = 356
Score = 30.7 bits (66), Expect = 2.0
Identities = 38/154 (24%), Positives = 42/154 (27%), Gaps = 2/154 (1%)
Frame = -2
Query: 974 GGFXXXRXXGXXGSXAGXRGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRFX 795
GGF G G G G G G+ G G G +GGG + G
Sbjct: 107 GGFGGGVGGGGGGEGGGLGGGG--GGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGG 164
Query: 794 XXGVXGGGXXY-XXXGGXGNSXXKTXXEXLXXXEGRNV-LGXGKXPXNXXXFWXQGGPXH 621
G GGG GG G K G G G F GG
Sbjct: 165 GLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGG 224
Query: 620 FLGXXGXFXXGRXGXXXPFXXNXXGKEXXXGGGL 519
G G G G G GGG+
Sbjct: 225 GFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGGM 258
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 30.7 bits (66), Expect = 2.0
Identities = 27/83 (32%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = -2
Query: 977 RGGFXXXRXXGXXGSXAGX----RGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGX 810
RGG R G G G RG G G G G GP GGG
Sbjct: 5 RGGGGRGRGRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRG----YEPG 60
Query: 809 FSRFXXXGVXGGGXXYXXXGGXG 741
R G GGG Y GG G
Sbjct: 61 GGRGYGGGGGGGGRGYGGGGGGG 83
>03_02_0765 + 11000724-11002496
Length = 590
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/78 (29%), Positives = 27/78 (34%)
Frame = -2
Query: 974 GGFXXXRXXGXXGSXAGXRGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRFX 795
GGF G G G G + G G G +G GGG + G F
Sbjct: 62 GGFGGGLGHGG-GLGGGFGGGKGGGLGGGGGLGGGGGAGGGFGGGLGHGGGLGGGFGGGK 120
Query: 794 XXGVXGGGXXYXXXGGXG 741
G+ GGG GG G
Sbjct: 121 GGGLGGGGGLGGGAGGGG 138
Score = 28.7 bits (61), Expect = 7.9
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Frame = -2
Query: 1016 GGXRXQRGXXVFXRGGFXXXRXXGXXGSXAGXRGKRX-FGXGVXGXVGXXXXGPXXRGGG 840
GG G GG G G G G G G G +G G GGG
Sbjct: 148 GGAGGGLGGGAGGGGGLGGGAGGGLGGGAGGGGGVGGGLGGGAGGGLGSGAGGGGGLGGG 207
Query: 839 ENPLXXISGXFSRFXXXGVXGGGXXYXXXGG 747
+ G G GGG GG
Sbjct: 208 AGGGGGLGGGAGGGLGGGAGGGGGAGGGLGG 238
>07_01_0516 - 3850252-3852870
Length = 872
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 875 PPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPP 976
PP P+ T PP PPP GP PP
Sbjct: 11 PPRLLPPQPPPTSRPLPPPPPPPPPAHGPSPPPP 44
>03_06_0088 - 31562596-31563096
Length = 166
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = -2
Query: 938 GSXAGXRGKRXFGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRFXXXGVXGGGXXYX 759
GS G +R G G +G G R GG+ SG RF G GGG +
Sbjct: 49 GSETGL-AQRGAADGSGGRLGTRGAG--GRDGGQLGARGASGGGGRFGARGAAGGGGRFG 105
Query: 758 XXGGXG 741
G G
Sbjct: 106 ARGAVG 111
>01_01_0082 + 625198-625719
Length = 173
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 926 PPNXPPPXXXGPXXTPPAXXPXXPFG 1003
PP PPP P TP P P+G
Sbjct: 74 PPPSPPPVAYPPPTTPSTNCPPPPYG 99
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +2
Query: 875 PPHXX---KPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXP 988
PPH KP+ + PP PPP P PP P
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQP 177
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.7 bits (61), Expect = 7.9
Identities = 39/166 (23%), Positives = 48/166 (28%), Gaps = 8/166 (4%)
Frame = +1
Query: 523 PPPXXXSLPXXXXXNGXXXPXLPXX--KXPXXPKKXXGPPWXQKXXXXXGXLPXPK--TF 690
PPP LP + P P P+ PP +P P T
Sbjct: 421 PPPSVTPLPPVVYPSPPEVTPSPPEIAPYPSPPEIVPSPPEITPYPSPPEIVPSPPEITP 480
Query: 691 LPSXXXXFSXXVFXXEFPXPPXKX*XXPPPXTPXXKNRE---NXPEIXXRGFSXXXXXXX 861
PS +P PP + PP TP E + PEI S
Sbjct: 481 YPSPPEVVPGPPEINPYPSPP-EIVPSPPEITPYPSPPEIVPSPPEITPYP-SPPEIVPS 538
Query: 862 XXX*XPTXPX-TPXPXYLXPRXPAXLPXXPXXRXXXNPPRXXTXXP 996
P+ P TP P + P P P P +PP P
Sbjct: 539 PPEIAPSPPIVTPMPPIIYPSPPEVTPSPPEITPYPSPPEVTPGPP 584
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = -2
Query: 974 GGFXXXRXXGXXGSXAGXRGKRX-FGXGVXGXVGXXXXGPXXRGGGENPLXXISGXFSRF 798
GG G G G G G G G G G GGG + G F
Sbjct: 59 GGVGVGGGGGFGGGAGGGLGHGGGIGGGFGGGKGGGLGGGVGVGGGIGHGGGVGGGFGGG 118
Query: 797 XXXGVXGGGXXYXXXGG 747
G+ GGG GG
Sbjct: 119 KGGGLGGGGGLGGGGGG 135
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 7.9
Identities = 24/111 (21%), Positives = 29/111 (26%), Gaps = 3/111 (2%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P PK + PP P + +P P + T P P
Sbjct: 148 PQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPT 207
Query: 854 XXXQXXXPPHXX---KPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXP 997
PP KP T+ PN PP P P P P
Sbjct: 208 PYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPP 258
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 875 PPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PPH P G PP PP P PPA P S P
Sbjct: 304 PPHPLPPGAGAGAGTGAPP-PPPAHPAAPAPPPPAPSPSAAGAGSGP 349
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 863 QXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPP 976
Q PP P G PP PPP G PP
Sbjct: 271 QVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPP 308
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,994,212
Number of Sequences: 37544
Number of extensions: 310585
Number of successful extensions: 1731
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3024393764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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