Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D05
(1029 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 36 0.24
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 36 0.24
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 36 0.24
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 36 0.24
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 36 0.24
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 36 0.24
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 36 0.32
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 35 0.55
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 35 0.55
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 34 0.73
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 34 0.73
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 32 3.9
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage factor
I 68 kDa subunit protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.24
Identities = 31/114 (27%), Positives = 32/114 (28%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P +PP P G PPP PL P L G P
Sbjct: 229 PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP 288
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP G PP PPP GP PP P P G P
Sbjct: 289 LGPLPPGPPPPVP-------GYGPPPG-PPPPQQGP-PPPPGPFPPRPPGPLGP 333
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.24
Identities = 31/114 (27%), Positives = 32/114 (28%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P +PP P G PPP PL P L G P
Sbjct: 229 PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP 288
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP G PP PPP GP PP P P G P
Sbjct: 289 LGPLPPGPPPPVP-------GYGPPPG-PPPPQQGP-PPPPGPFPPRPPGPLGP 333
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 35.9 bits (79), Expect = 0.24
Identities = 29/114 (25%), Positives = 30/114 (26%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P R PP P S PPP P T P P
Sbjct: 280 PPPSRGGPPPPPPPPHSS---GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPP 336
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP P + G PP P GP PP P P G P
Sbjct: 337 PPPNRMYPP--PPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 35.9 bits (79), Expect = 0.24
Identities = 29/114 (25%), Positives = 30/114 (26%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P R PP P S PPP P T P P
Sbjct: 280 PPPSRGGPPPPPPPPHNS---GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP 336
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP P + G PP P GP PP P P G P
Sbjct: 337 PPPNRMYPP--PPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenylation
specific factor 6, 68 kD subunit variant protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.24
Identities = 31/114 (27%), Positives = 32/114 (28%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P +PP P G PPP PL P L G P
Sbjct: 229 PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP 288
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP G PP PPP GP PP P P G P
Sbjct: 289 LGPLPPGPPPPVP-------GYGPPPG-PPPPQQGP-PPPPGPFPPRPPGPLGP 333
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 35.9 bits (79), Expect = 0.24
Identities = 29/114 (25%), Positives = 30/114 (26%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P R PP P S PPP P T P P
Sbjct: 280 PPPSRGGPPPPPPPPHNS---GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP 336
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP P + G PP P GP PP P P G P
Sbjct: 337 PPPNRMYPP--PPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 35.5 bits (78), Expect = 0.32
Identities = 29/114 (25%), Positives = 30/114 (26%)
Frame = +2
Query: 674 PXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPX 853
P P R PP P S PPP P T P P
Sbjct: 280 PPPSRGGPPPPPPPPHNS---GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP 336
Query: 854 XXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP P + G PP P GP PP P P G P
Sbjct: 337 PPPNRMYPP--PPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.55
Identities = 29/128 (22%), Positives = 34/128 (26%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P + P G G P P+ P P G PPP P
Sbjct: 156 PPHPGKPEGPPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGPPPQGGN 213
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
G P+ + PPH KP+ G P PPP P
Sbjct: 214 QSQGP-PPRPGKPEGSPSQGGNKPQGPPPHPGKPQGPPP-QEGNKPQRPPPPGRPQGPPP 271
Query: 974 PAXXPXXP 997
P P P
Sbjct: 272 PGGNPQQP 279
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.55
Identities = 29/128 (22%), Positives = 34/128 (26%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P + P G G P P+ P P G PPP P
Sbjct: 156 PPHPGKPEGPPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGPPPQGGN 213
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
G P+ + PPH KP+ G P PPP P
Sbjct: 214 QSQGP-PPRPGKPEGSPSQGGNKPQGPPPHPGKPQGPPP-QEGNKPQRPPPPGRPQGPPP 271
Query: 974 PAXXPXXP 997
P P P
Sbjct: 272 PGGNPQQP 279
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.73
Identities = 29/128 (22%), Positives = 33/128 (25%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P P G G P P+ P P G PPP P
Sbjct: 156 PPRPGKPEGPPPQGGNQSQGPPPRPGKPE--GPPPQGGNQSQGPPPRPGKPEGPPPQGGN 213
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
G P+ + PPH KP+ G P PPP P
Sbjct: 214 QSQGP-PPRPGKPEGSPSQGGNKPRGPPPHPGKPQGPPP-QEGNKPQRPPPPRRPQGPPP 271
Query: 974 PAXXPXXP 997
P P P
Sbjct: 272 PGGNPQQP 279
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.73
Identities = 29/128 (22%), Positives = 33/128 (25%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P P G G P P+ P P G PPP P
Sbjct: 156 PPRPGKPEGPPPQGGNQSQGPPPRPGKPE--GQPPQGGNQSQGPPPRPGKPEGPPPQGGN 213
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
G P+ + PPH KP+ G P PPP P
Sbjct: 214 QSQGP-PPRPGKPEGSPSQGGNKPQGPPPHPGKPQGPPP-QEGNKPQRPPPPGRPQGPPP 271
Query: 974 PAXXPXXP 997
P P P
Sbjct: 272 PGGNPQQP 279
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 3.9
Identities = 29/108 (26%), Positives = 30/108 (27%)
Frame = +2
Query: 692 SPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXXXKTGKIXPKLXXGDFXXXPXXXXQXX 871
+PP P G PPP PL P L G P
Sbjct: 272 TPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP 331
Query: 872 XPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTPPAXXPXXPFGXSXP 1015
PP G PP PPP GP PP P P G P
Sbjct: 332 GPPPPVP-------GYGPPPG-PPPPQQGP-PPPPGPFPPRPPGPLGP 370
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,032,726
Number of Sequences: 237096
Number of extensions: 1642585
Number of successful extensions: 6255
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5435
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13876114826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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