Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D05
(1029 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118781-1|AAM50641.1| 117|Drosophila melanogaster GH13168p pro... 33 0.48
AE014297-3096|AAF55954.1| 117|Drosophila melanogaster CG5778-PA... 33 0.48
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 33 0.64
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 33 0.64
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 29 7.8
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 29 7.8
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 29 7.8
>AY118781-1|AAM50641.1| 117|Drosophila melanogaster GH13168p
protein.
Length = 117
Score = 33.5 bits (73), Expect = 0.48
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Frame = -2
Query: 986 VFXRGGFXXXRXXGXXGSXA--GXRGKRXFGXG--VXGXVGXXXXGPXXRGGGENPLXXI 819
V+ GG G G G G R G G G G G GGG P+
Sbjct: 22 VYIGGGCYDCNPPGGQGPGVYTGGNGGRGGGGGYNAGGGGGGYYNGGGGGGGGRRPVY-- 79
Query: 818 SGXFSRFXXXGVXGGGXXYXXXGGXG 741
SG F G GGG Y GG G
Sbjct: 80 SGNFGPGYGNGGGGGGGGYGGGGGGG 105
>AE014297-3096|AAF55954.1| 117|Drosophila melanogaster CG5778-PA
protein.
Length = 117
Score = 33.5 bits (73), Expect = 0.48
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Frame = -2
Query: 986 VFXRGGFXXXRXXGXXGSXA--GXRGKRXFGXG--VXGXVGXXXXGPXXRGGGENPLXXI 819
V+ GG G G G G R G G G G G GGG P+
Sbjct: 22 VYIGGGCYDCNPPGGQGPGVYTGGNGGRGGGGGYNAGGGGGGYYNGGGGGGGGRRPVY-- 79
Query: 818 SGXFSRFXXXGVXGGGXXYXXXGGXG 741
SG F G GGG Y GG G
Sbjct: 80 SGNFGPGYGNGGGGGGGGYGGGGGGG 105
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.64
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Frame = +2
Query: 875 PPHXXKPRXQXTFXXGXPPNXPPP-----XXXGPXXTPPAXXPXXP 997
PP PR Q T G PP PPP GP PP P P
Sbjct: 208 PPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQP 253
Score = 31.1 bits (67), Expect = 2.6
Identities = 31/128 (24%), Positives = 36/128 (28%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P P GS G P P S+ P + P + PPP P
Sbjct: 37 PSVPFPPPGSGNGIEDSGIGPGPAPSA-PAPSYGPPQTRPPPPPPPPQPTPPAPRPSYGP 95
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
+T P+ P PP PR P PP GP TP
Sbjct: 96 PQTQ--PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPP---PQPTPSAPAPPPSYGPPQTP 150
Query: 974 PAXXPXXP 997
P P P
Sbjct: 151 PPRPPPQP 158
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.64
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Frame = +2
Query: 875 PPHXXKPRXQXTFXXGXPPNXPPP-----XXXGPXXTPPAXXPXXP 997
PP PR Q T G PP PPP GP PP P P
Sbjct: 208 PPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQP 253
Score = 31.1 bits (67), Expect = 2.6
Identities = 31/128 (24%), Positives = 36/128 (28%)
Frame = +2
Query: 614 PKNXXXPLGSKKXXGXXGXCPXPKRSSPPXXAXSPXGSXXXNSPPPXXXXXXXPLRXXXX 793
P P GS G P P S+ P + P + PPP P
Sbjct: 37 PSVPFPPPGSGNGIEDSGIGPGPAPSA-PAPSYGPPQTRPPPPPPPPQPTPPAPRPSYGP 95
Query: 794 XKTGKIXPKLXXGDFXXXPXXXXQXXXPPHXXKPRXQXTFXXGXPPNXPPPXXXGPXXTP 973
+T P+ P PP PR P PP GP TP
Sbjct: 96 PQTQ--PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPP---PQPTPSAPAPPPSYGPPQTP 150
Query: 974 PAXXPXXP 997
P P P
Sbjct: 151 PPRPPPQP 158
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding protein
protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 1029 GXXXWGXEXPKGXXGXXAGGVXXGPXXXGGGXXGGXPXXKVXWXRGXWXC 880
G G +G G GG G GGG GG V G W C
Sbjct: 237 GGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKC 286
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 1029 GXXXWGXEXPKGXXGXXAGGVXXGPXXXGGGXXGGXPXXKVXWXRGXWXC 880
G G +G G GG G GGG GG V G W C
Sbjct: 199 GGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGEWKC 248
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding protein
protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 1029 GXXXWGXEXPKGXXGXXAGGVXXGPXXXGGGXXGGXPXXKVXWXRGXWXC 880
G G +G G GG G GGG GG V G W C
Sbjct: 237 GGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKC 286
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,063,728
Number of Sequences: 53049
Number of extensions: 499756
Number of successful extensions: 2280
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5229095424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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