Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_D04
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 86 4e-17
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 84 1e-16
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 77 2e-14
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 77 2e-14
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 77 2e-14
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 77 2e-14
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 69 3e-12
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 34 0.15
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 34 0.15
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 30 1.9
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 30 1.9
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 30 1.9
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 85.8 bits (203), Expect = 4e-17
Identities = 40/79 (50%), Positives = 51/79 (64%)
Frame = +1
Query: 355 PNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGXSDHPD 534
P+D NRH+GDLGN+ + I + D SLSG + IIGR+VV+HEK DD G
Sbjct: 98 PDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 535 SRKTGXAGGRVACGVIGIL 591
S+ TG AG R+ACG IGI+
Sbjct: 158 SKTTGNAGSRLACGTIGIV 176
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 162 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHK 341
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 342 DHGSSE 359
HG+ +
Sbjct: 94 SHGAPD 99
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +1
Query: 355 PNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGXSDHPD 534
P+D NRH+GDLGN+ + I + D SLSG + IIGR+VV+HEK DD G
Sbjct: 98 PDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 535 SRKTGXAGGRVACGVIG 585
S+ TG AG R+ACG IG
Sbjct: 158 SKTTGNAGSRLACGTIG 174
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 162 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHK 341
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 342 DHGSSE 359
HG+ +
Sbjct: 94 SHGAPD 99
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +1
Query: 355 PNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGXSDHPD 534
P+D NRH+GDLGN+ + I + D SLSG + IIGR+VV+HEK DD G
Sbjct: 98 PDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 535 SRKTGXAGGRVACGVIG 585
S+ TG AG R+ACG IG
Sbjct: 158 SKTTGNAGSRLACGTIG 174
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 162 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHK 341
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 342 DHGSSE 359
HG+ +
Sbjct: 94 SHGAPD 99
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 144 SRAIAVLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 320
+RA+AVL ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 321 HFNPEHKDHG 350
HFNP K HG
Sbjct: 63 HFNPFGKTHG 72
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +1
Query: 340 RTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYG- 516
+T P RHVGDLGNV ++I L D ++L GP+ ++GR++V+H DD G
Sbjct: 69 KTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
Query: 517 --XSDHPDSRKTGXAGGRVACGVIGI 588
+S+KTG AG R ACGVI +
Sbjct: 129 GVGDKAEESKKTGNAGARAACGVIAL 154
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 144 SRAIAVLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 320
+RA+AVL ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 321 HFNPEHKDHG 350
HFNP K HG
Sbjct: 63 HFNPFGKTHG 72
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +1
Query: 340 RTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYG- 516
+T P RHVGDLGNV ++I L D ++L GP+ ++GR++V+H DD G
Sbjct: 69 KTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
Query: 517 --XSDHPDSRKTGXAGGRVACGVIGI 588
+S+KTG AG R ACGVI +
Sbjct: 129 GVGDKAEESKKTGNAGARAACGVIAL 154
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 144 SRAIAVLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 320
+RA+AVL ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 321 HFNPEHKDHG 350
HFNP K HG
Sbjct: 63 HFNPFGKTHG 72
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +1
Query: 340 RTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYG- 516
+T P RHVGDLGNV ++I L D ++L GP+ ++GR++V+H DD G
Sbjct: 69 KTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
Query: 517 --XSDHPDSRKTGXAGGRVACGVIGI 588
+S+KTG AG R ACGVI +
Sbjct: 129 GVGDKAEESKKTGNAGARAACGVIAL 154
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 144 SRAIAVLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 320
+RA+AVL ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 25 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 84
Query: 321 HFNPEHKDHG 350
HFNP K HG
Sbjct: 85 HFNPFGKTHG 94
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +1
Query: 340 RTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYG- 516
+T P RHVGDLGNV ++I L D ++L GP+ ++GR++V+H DD G
Sbjct: 91 KTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 150
Query: 517 --XSDHPDSRKTGXAGGRVACGVIGI 588
+S+KTG AG R ACGVI +
Sbjct: 151 GVGDKAEESKKTGNAGARAACGVIAL 176
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 147 RAIAVLSTETIRGNITFTQVQDGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 323
RA+AVL + G + TQ +G+ +G I GL PG +GFH+H+ GD + GC S G H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 324 FNPEHKDHGSSE 359
FNP +HG +
Sbjct: 84 FNPCKMNHGGRD 95
Score = 64.5 bits (150), Expect = 9e-11
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 358 NDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYG---XSDH 528
+ V RHVGDLGNV ++I D +SL G + +IGR++V+H DD G
Sbjct: 95 DSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKA 154
Query: 529 PDSRKTGXAGGRVACGVIGI 588
+S KTG AG R ACGVI +
Sbjct: 155 EESLKTGNAGARAACGVIAL 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 123 HHGFTTPSRAIAVLSTETIR--GNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLS 296
H F + A+A+L T G TF+Q+ + + G + LP G + +H+ GD S
Sbjct: 875 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 934
Query: 297 GGCLSTGSHFN 329
GC G+ F+
Sbjct: 935 EGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 123 HHGFTTPSRAIAVLSTETIR--GNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLS 296
H F + A+A+L T G TF+Q+ + + G + LP G + +H+ GD S
Sbjct: 666 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 725
Query: 297 GGCLSTGSHFN 329
GC G+ F+
Sbjct: 726 EGCSRVGAPFS 736
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +3
Query: 231 GGITGLPPGEYGFH----VHEKGDLSGGCLSTGSHFNPEHKDHGSSERCQPSRR*PWKRG 398
G I +P G++G H SGG G N D SS+R Q RR G
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQRRSSMSAG 135
Query: 399 L*REXLQQDRPGRRPDLAIGSARXHRQSGG 488
G++P + GSAR R GG
Sbjct: 136 SESGGRGGGGGGQKPSSSRGSARGMRGGGG 165
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +3
Query: 231 GGITGLPPGEYGFH----VHEKGDLSGGCLSTGSHFNPEHKDHGSSERCQPSRR*PWKRG 398
G I +P G++G H SGG G N D SS+R Q RR G
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQQQRRSSMSAG 639
Query: 399 L*REXLQQDRPGRRPDLAIGSARXHRQSGG 488
G++P + GSAR R GG
Sbjct: 640 SESGGRGGGGGGQKPSSSRGSARGMRGGGG 669
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 307 YRLDLISILNIRTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGI 471
Y +D I IL + + D N V DL + +F H+SR+D+V I +G+
Sbjct: 374 YSVDEI-ILGMASQIAERDDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 427
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 307 YRLDLISILNIRTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGI 471
Y +D I IL + + D N V DL + +F H+SR+D+V I +G+
Sbjct: 374 YSVDEI-ILGMASQIAERDDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 427
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 307 YRLDLISILNIRTTXHPNDVNRHVGDLGNVVFDEXHYSRIDLVDDQISLSGPHGI 471
Y +D I IL + + D N V DL + +F H+SR+D+V I +G+
Sbjct: 384 YSVDEI-ILGMASQIAERDDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,763,990
Number of Sequences: 27780
Number of extensions: 304857
Number of successful extensions: 704
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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