Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_D02
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     78   1e-14
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     77   2e-14
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    75   1e-13
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   3.6  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   3.6  
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969...    28   8.3  
06_01_0486 - 3455030-3455770                                           28   8.3  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = +3

Query: 120 MPREIXXXKXFLIKAXXXXAXSVKIKXXPENVKFXVRCSRFLYTLVITDKEXAEKLKXSL 299
           MP++I   K FL+ A    A SV+IK   + VKF VRCSR+LYTL + D + A KLK SL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSL 60

Query: 300 PPGLQVKEV 326
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = +3

Query: 120 MPREIXXXKXFLIKAXXXXAXSVKIKXXPENVKFXVRCSRFLYTLVITDKEXAEKLKXSL 299
           MP++I   K FL+ A    A SV+IK   + VKF VRCS++LYTL + D + A KLK SL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSL 60

Query: 300 PPGLQVKEV 326
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +3

Query: 123 PREIXXXKXFLIKAXXXXAXSVKIKXXPENVKFXVRCSRFLYTLVITDKEXAEKLKXSLP 302
           P++I   K FL+ A    A SV+IK   + VKF VRCS++LYTL + D + A KLK SLP
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLP 91

Query: 303 PGLQVKEV 326
           PGL V+EV
Sbjct: 92  PGLTVQEV 99


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 739 ATGLXXPXXRXPXXPPTPGXPPXKPXXXXAPP 834
           A+ L  P  R P  PP P  PP KP     PP
Sbjct: 610 ASALPPPPPRPPGAPPPP-PPPGKPGGPPPPP 640


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 739  ATGLXXPXXRXPXXPPTPGXPPXKPXXXXAPP 834
            A+ L  P  R P  PP P  PP KP     PP
Sbjct: 915  ASALSPPPPRPPGAPPPP-PPPGKPGGPPPPP 945


>07_03_1012 +
           23295976-23296264,23296475-23296548,23296972-23296996,
           23297486-23297568,23297653-23297685,23298322-23298469,
           23298625-23298722
          Length = 249

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -1

Query: 848 GXXAXGGAXXXXGXSGGXPGVGGXXGXRXWG 756
           G    GG     G SGG  G G   G R WG
Sbjct: 20  GAGTSGGGGGGGGGSGGGGGGGRWSGVRPWG 50


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +1

Query: 757 PXXRXPXXPPTPGXPPXKPXXXXAPP 834
           P    P  PPTP  PP  P     PP
Sbjct: 73  PSCHPPYTPPTPRPPPTPPYVPSPPP 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,405
Number of Sequences: 37544
Number of extensions: 194500
Number of successful extensions: 1323
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)