Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_D01
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    34   0.16 
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    33   0.27 
AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical ...    31   0.83 
U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U64842-8|AAB37085.1|  173|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    29   5.9  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    29   5.9  
Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/107 (27%), Positives = 51/107 (47%)
 Frame = +3

Query: 231 WQEARLRCRLEGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSKGDFRSIEGVP 410
           W  A  +C   G+ LAS + + L+   +  +     +  I  G++ +  +  FR+ +G P
Sbjct: 206 WYTASEKCIGYGAHLAS-IHSRLELGFVQRLVPVNQTAWI--GVNDIQKENVFRNSDGTP 262

Query: 411 LAKIPHDWADYEPDNAGGDENCILMYPDGNFADVNCTDTFQYVCYKK 551
           +    + W   +PDN   +ENC+ +   G + D  C  T  +VC KK
Sbjct: 263 VDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKKK 307


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 444 EPDNAGGDENCILMYPDGNFADVNC--TDTFQYVCYK 548
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 444 EPDNAGGDENCILMYPDGNFADVNC--TDTFQYVCYK 548
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical
           protein F40G9.10 protein.
          Length = 188

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +3

Query: 174 YTYFRNINGWLKLQEIPAIWQEARLRCRLEGSVLAS--PLDAALKSSMLSLITNKKSSCG 347
           YT+F   N   K     A + +A   CR EGS LAS   L        LS   N+ +S  
Sbjct: 52  YTWFSYTNFCYKSTARAANFNDAHNACRSEGSELASIHSLTENQFLVQLSAAGNRVNSKT 111

Query: 348 IYTGIHALFSKGDFRSIEGVPLAKIPHDWADYEPDN 455
            Y  I  +F   ++   +G  +  +  +WA  EP+N
Sbjct: 112 NYVMIGLIFENREWSWTDGSSVNYL--NWAAGEPNN 145


>U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical
           protein C50E3.15 protein.
          Length = 339

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 417 KIPHDWADYEPDNAGGDENCILMY--PDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSV 590
           K  ++W D EP+  GG   C+ +Y  PD         D   YV + K   +  +   GSV
Sbjct: 153 KAGYNWDDGEPNGIGGRRFCLYLYIEPDIKSEMHGKVDDTAYVAFWKPNESCYLCEWGSV 212


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 426 HDWADYEPDNAGGDENCILMYPDG----NFADVNCTDTFQYVC 542
           H++A+  P+N  GD  CI     G    N+A+ +CT+T  +VC
Sbjct: 59  HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC 99


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
 Frame = +3

Query: 123 LYLILICSVVGQQFRYDYTYFRNINGWLKLQEIPAIWQEARLRCRLEGSVLASPLDAALK 302
           L L L  +   Q       Y  + N   +    PA ++ A  +C L G  LAS  +    
Sbjct: 7   LTLALFGATAAQTCNTGGIYNAHFNRCYQYFTAPAQFEFAEEQCNLLGGHLASVQNGQEN 66

Query: 303 SSMLSLITN--KKSSCGIY-TGIHALFSKGDFRSIEGVPLAKIPHDWADYEPDNAGGDEN 473
           + + S   N  K+S+   Y  G + L + G ++  +      +  D+++++        +
Sbjct: 67  ALLQSNAANSFKRSNYSDYWIGANDLETSGTWKWTD----PSVTFDYSNWQLGEPQSGSD 122

Query: 474 CILMYP-DGNFADVNCTDTFQYVC 542
           C +    DG ++ + CT    YVC
Sbjct: 123 CAIQDKGDGTWSAIGCTSYRPYVC 146


>U64842-8|AAB37085.1|  173|Caenorhabditis elegans Hypothetical
           protein F25B4.9 protein.
          Length = 173

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
 Frame = +3

Query: 171 DYTYFRNINGWLKLQEIPAIWQEARLRCRLEGSVLASPLDAALKSSMLSLITNKKSSCGI 350
           ++ YF   N   KL +    W  A  +C  +G+   S +D+  ++  +  ++       I
Sbjct: 27  NWRYFPQTNSCYKLIDENLPWTIAEFKCLFQGAHHVS-IDSPEENQFVHELSRWSE---I 82

Query: 351 YTGIHALFSKGD-FRSIEGVPLAKIPHDWADYEPDNAGGDENCILMYPDGNFADVNCTDT 527
           +TG  A F K   + + +G        +W D           CI M  DGN       + 
Sbjct: 83  WTGA-AFFGKDQHYVNSDGSRYGNF-ENWKDGRKPPMNRARRCIKM--DGN------GEW 132

Query: 528 FQYVCYKKKTSTVAMSSCGSVDSEYTLSKETGXCYKF 638
           FQ  C KKKT T+         S Y+ S  +   ++F
Sbjct: 133 FQSCC-KKKTFTICEKKAAYSASSYSGSNNSVNGFRF 168


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 444 EPDNAGGDENCILMYPDGNFADVNCT--DTFQYVCYKK 551
           EP+N   +E+C+LM   G  +D  CT  D   +VC K+
Sbjct: 161 EPNNGSLNEHCLLMNWQGFMSDQFCTIPDYTGWVCGKR 198


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 260 GRICIGFTSGRCFKKQHAV 316
           G IC+GF  GR  K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218


>Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical
           protein F44F1.3 protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 342 CGIYTGIHALFSKGDFRSIEGVPLAKIP 425
           CG Y GIH   S   F ++ G P+  IP
Sbjct: 210 CGNYKGIHGFQSLSAFSALTGSPVLLIP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,480,409
Number of Sequences: 27780
Number of extensions: 313768
Number of successful extensions: 709
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)