Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C23
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   162   4e-40
AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    38   0.013
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    38   0.013
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  162 bits (393), Expect = 4e-40
 Identities = 74/110 (67%), Positives = 89/110 (80%)
 Frame = +3

Query: 153 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 332
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 333 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGS 482
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGS
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGS 120



 Score =  130 bits (313), Expect = 2e-30
 Identities = 60/105 (57%), Positives = 77/105 (73%)
 Frame = +1

Query: 490 RGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDXLXRHLRCYR 669
           +GL VA GMAYVGKY D+A YRV+CL+GDGE+AEGS+WE+  FAS YKLD L   +   R
Sbjct: 123 QGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVDVNR 182

Query: 670 LGQSEPTSLQHQXEVYDARLKASGLNSLVVDGHDVTXLVXAFDXA 804
           LGQS+ TSL H  E Y AR  A G N+++V+GH+V  L+ A++ A
Sbjct: 183 LGQSQATSLGHDVETYKARFAAFGFNAIIVNGHNVDELLAAYETA 227


>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 30/111 (27%), Positives = 48/111 (43%)
 Frame = +1

Query: 460 SWTSAPAPWARGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLD 639
           ++ +  +P    L  A G AY  K             GDG A+EG    + +FA+  K  
Sbjct: 185 NFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCP 244

Query: 640 XLXRHLRCYRLGQSEPTSLQHQXEVYDARLKASGLNSLVVDGHDVTXLVXA 792
            +    R      S PTS Q+  +    +  A GL+++ VDG+D+  +  A
Sbjct: 245 IIF-FCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNA 294


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 30/111 (27%), Positives = 48/111 (43%)
 Frame = +1

Query: 460 SWTSAPAPWARGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLD 639
           ++ +  +P    L  A G AY  K             GDG A+EG    + +FA+  K  
Sbjct: 184 NFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCP 243

Query: 640 XLXRHLRCYRLGQSEPTSLQHQXEVYDARLKASGLNSLVVDGHDVTXLVXA 792
            +    R      S PTS Q+  +    +  A GL+++ VDG+D+  +  A
Sbjct: 244 IIF-FCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNA 293


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 391 WTS*RTCASWTRTWRATPPRDSTSWTSAPA 480
           W S  T  S   +W A P   STSW +APA
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPA 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,207,913
Number of Sequences: 27780
Number of extensions: 297799
Number of successful extensions: 881
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)