Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C22
(1121 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 37 0.030
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.069
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.069
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 33 0.37
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.49
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.49
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 2.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.0
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 6.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 7.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 7.9
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.7 bits (81), Expect = 0.030
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +3
Query: 552 PNNLXPXXSXXPPP-PXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXX 728
P N P + P P P H P P P P P PP P
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH 147
Query: 729 FPPPHP 746
+PPP P
Sbjct: 148 YPPPPP 153
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.069
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPPP PP P R P PP P +PPP P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPP 368
Query: 747 XRXXTXXPSH-XIPPXP 794
R H IPP P
Sbjct: 369 SRPPAPPSGHGMIPPPP 385
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P + PPPP PP P P T +P PP P PPP P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 747 XRXXTXXPSHXIPPXP 794
P PP P
Sbjct: 339 --PGMRYPGGMPPPPP 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +3
Query: 585 PPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPT-----QXRXXPXXXXFPPPHPX 749
PPPP PP P P P P S PP + P PPP P
Sbjct: 264 PPPPPSVTPMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 750 RXXTXXPSHXIPPXPXTALXF 812
+PP P + +
Sbjct: 323 SRFGPPGMGGMPPPPPPGMRY 343
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.069
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPPP PP P R P PP P +PPP P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPP 378
Query: 747 XRXXTXXPSH-XIPPXP 794
R H IPP P
Sbjct: 379 SRPPAPPSGHGMIPPPP 395
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P + PPPP PP P P T +P PP P PPP P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 747 XRXXTXXPSHXIPPXP 794
P PP P
Sbjct: 349 --PGMRYPGGMPPPPP 362
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +3
Query: 585 PPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPT-----QXRXXPXXXXFPPPHPX 749
PPPP PP P P P P S PP + P PPP P
Sbjct: 274 PPPPPSVTPMPP-PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 750 RXXTXXPSHXIPPXPXTALXF 812
+PP P + +
Sbjct: 333 SRFGPPGMGGMPPPPPPGMRY 353
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 938 PXXSPPXXXPPPKXPPXPXPP 1000
P SPP PPP PP P PP
Sbjct: 350 PIISPPAPPPPPPPPPPPPPP 370
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.49
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +3
Query: 588 PPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHPXRXXTXX 767
PPP PP P P + R + PP P PPPHP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGR-GMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGP 348
Query: 768 PSHXIPPXP 794
PP P
Sbjct: 349 YPPFFPPPP 357
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPPP H P P + P P R P FPPP P
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.49
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +3
Query: 588 PPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHPXRXXTXX 767
PPP PP P P + R + PP P PPPHP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGR-GMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGP 348
Query: 768 PSHXIPPXP 794
PP P
Sbjct: 349 YPPFFPPPP 357
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPPP H P P + P P R P FPPP P
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.64
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P + PPPP PP P P P+S PP P PPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 776
Query: 747 XRXXTXXPSHXIPP 788
P PP
Sbjct: 777 PGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 552 PNNLXPXXSXXPPPPXHHXXXPPXPXXPXP 641
P L P PPPP PP P P P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.64
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P + PPPP PP P P P+S PP P PPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 776
Query: 747 XRXXTXXPSHXIPP 788
P PP
Sbjct: 777 PGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 552 PNNLXPXXSXXPPPPXHHXXXPPXPXXPXP 641
P L P PPPP PP P P P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.64
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P + PPPP PP P P P+S PP P PPP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 359
Query: 747 XRXXTXXPSHXIPP 788
P PP
Sbjct: 360 PGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 552 PNNLXPXXSXXPPPPXHHXXXPPXPXXPXP 641
P L P PPPP PP P P P
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/94 (31%), Positives = 30/94 (31%)
Frame = -3
Query: 999 GGXGXGGXFGGGXXXGGEXXGVXXXSXXGHXXRGXXLXCPGXVXXVGEXXXXQXEEXRVV 820
GG G GG GGG GG G S G G C G G
Sbjct: 127 GGGGCGGG-GGGGCGGGSSGGCGGGSSGGCGGGGGG-GCGG--GGGGGCGGGSSGGGGYA 182
Query: 819 VR*XVGRXXGXGGXCGRGGXXXGXXGGXGEXXGG 718
V G G GG G GG GG G GG
Sbjct: 183 VAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/94 (31%), Positives = 30/94 (31%)
Frame = -3
Query: 999 GGXGXGGXFGGGXXXGGEXXGVXXXSXXGHXXRGXXLXCPGXVXXVGEXXXXQXEEXRVV 820
GG G GG GGG GG G S G G C G G
Sbjct: 127 GGGGCGGG-GGGGCGGGSSGGCGGGSSGGCGGGGGG-GCGG--GGGGGCGGGSSGGGGYA 182
Query: 819 VR*XVGRXXGXGGXCGRGGXXXGXXGGXGEXXGG 718
V G G GG G GG GG G GG
Sbjct: 183 VAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +3
Query: 576 SXXPPPPXHHXXX-----PPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPP 740
S PPPP PP P P T P PP+ R P P P
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP--PSP 178
Query: 741 HPXRXXTXXPSHXIPPXP 794
P PS PP P
Sbjct: 179 EPRNPPRTPPSPIPPPPP 196
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPPP P P P P T + P PP P PPP P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPT--MSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 938 PXXSPPXXXPPPKXPPXPXPPXXAXXXFPXXTPXXXXXRISSPXXSXSPPXXXXPS 1105
P PP P PP P PP + P + SP PP PS
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPS 1398
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/107 (21%), Positives = 28/107 (26%), Gaps = 1/107 (0%)
Frame = +2
Query: 683 TXASHPTTXXSXPPXL-SPXPPXXXXXXXXXXXXXXXPXHXXXXXXXXXXXSSXXXXXXS 859
T A+ PTT PP +P PP P +
Sbjct: 165 TTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPK 224
Query: 860 PTXXTXPGXHNXXPRXXWPXXXXXXTPXXSPPXXXPPPKXPPXPXPP 1000
P T P + P +PP P P P P PP
Sbjct: 225 PAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPP 271
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 585 PPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHPXRXXTX 764
PPPP PP P P T P + PPT + P P P
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKA-PPPPTTNKEVTTVAPVPKPAPVTAPAP 233
Query: 765 XP 770
P
Sbjct: 234 NP 235
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = -3
Query: 1113 RAXEGXXXXGGXSEXXGLDMRXXXXXGVXXGKXXXAXLGGXGXGGXFGGGXXXGGEXXG 937
++ G G + G R G G+ GG G GG FGG GG G
Sbjct: 794 KSSRGKSGTSGFGQRGGYGGRGGGFGGTGRGRGGGV-FGGGGRGGDFGGSGNFGGSGGG 851
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/94 (29%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Frame = -3
Query: 804 GRXXGXGGXCGRGGXXXGXXGGXGEXXGGXXXXVVGWEAXVXXC*VXDXSXXWCLXKEXX 625
G G GG CG GG G GG G GG G C C
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG-------CGGGGGCGGGCAPPPPP 115
Query: 624 ---GXEVXRXDGXAGGGXXTXXVXGCLG*GXXGC 532
G G GGG GC G G GC
Sbjct: 116 PACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGC 149
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 950 PPXXXPPPKXPPXPXPP 1000
PP PPP PP P PP
Sbjct: 67 PPPICPPPPPPPMPCPP 83
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 694 PPNXXXXPPXXXFPXPTPXAXXPAXPPTXSPXXXXPPYXSTHNHSP 831
PP PP FP T + PPT +P PP N SP
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPT-TPKPAPPPPSRIPNPSP 478
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 694 PPNXXXXPPXXXFPXPTPXAXXPAXPPTXSPXXXXPPYXSTHNHSP 831
PP PP FP T + PPT +P PP N SP
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPT-TPKPAPPPPSRIPNPSP 485
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +2
Query: 935 TPXXSPPXXXPPPKXPPXPXPPXXAXXXFPXXTPXXXXXRISSPXXSXSPPXXXXP 1102
TP +P PPP P P P P I++P PP P
Sbjct: 465 TPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 938 PXXSPPXXXPPPKXPPXPXPP 1000
P + P PPP PP P PP
Sbjct: 503 PPIATPSSVPPPPPPPPPPPP 523
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/76 (25%), Positives = 22/76 (28%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPP PP P P P + + PP R P PPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS-PPPPPPPRGSPPTGSLPPPQA 317
Query: 747 XRXXTXXPSHXIPPXP 794
+ PP P
Sbjct: 318 GGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/76 (25%), Positives = 22/76 (28%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPP PP P P P + + PP R P PPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS-PPPPPPPRGSPPTGSLPPPQA 338
Query: 747 XRXXTXXPSHXIPPXP 794
+ PP P
Sbjct: 339 GGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/76 (25%), Positives = 22/76 (28%)
Frame = +3
Query: 567 PXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPPPHP 746
P PPP PP P P P + + PP R P PPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS-PPPPPPPRGSPPTGSLPPPQA 323
Query: 747 XRXXTXXPSHXIPPXP 794
+ PP P
Sbjct: 324 GGSPPPAGTGSPPPPP 339
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 938 PXXSPPXXXPPPKXPPXPXP 997
P +PP PPP PP P P
Sbjct: 21 PVTAPPGLHPPPPVPPVPVP 40
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +3
Query: 558 NLXPXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPP 737
N P + PPPP ++ PP P P P P PP Q P P
Sbjct: 85 NRRPQPTPGPPPPRNNCLPPPGP--PPPCQQYQQPQP-------PPCQRPQPPQPQ--PQ 133
Query: 738 PHPXRXXTXXPS 773
P+P R PS
Sbjct: 134 PYPQRTGGCLPS 145
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +3
Query: 558 NLXPXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPP 737
N P + PPPP ++ PP P P P P PP Q P P
Sbjct: 85 NRRPQPTPGPPPPRNNCLPPPGP--PPPCQQYQQPQP-------PPCQRPQPPQPQ--PQ 133
Query: 738 PHPXRXXTXXPS 773
P+P R PS
Sbjct: 134 PYPQRTGGCLPS 145
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +3
Query: 558 NLXPXXSXXPPPPXHHXXXPPXPXXPXPNTNXXXRLPLSXTXXXPPTQXRXXPXXXXFPP 737
N P + PPPP ++ PP P P P P PP Q P P
Sbjct: 85 NRRPQPTPGPPPPRNNCLPPPGP--PPPCQQYQQPQP-------PPCQRPQPPQPQ--PQ 133
Query: 738 PHPXRXXTXXPS 773
P+P R PS
Sbjct: 134 PYPQRTGGCLPS 145
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.9
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -2
Query: 793 GXGGMXWEGXXVXXRXGWGGGKXXXXGXXRX---WVGGXXXVXLSGRRXXXLVFGXGXXG 623
G GG W GWGGG+ G W G G R G G G
Sbjct: 49 GGGGPGWGRGG--GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 622 XGGXXX*WXGGGGXXDXXG 566
GG GGGG G
Sbjct: 107 GGGGRGGGGGGGGGRGGGG 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,505,587
Number of Sequences: 27780
Number of extensions: 163145
Number of successful extensions: 1897
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3025992820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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