Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C21
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z50859-5|CAA90729.1|  135|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81048-3|CAB02841.1|  407|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical
           protein C25F9.1 protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 512 FEIEDLVXLLKREXSRDIFVATVPQDXRYVDY 607
           +E+EDLV +     +  I V T+  D RYVD+
Sbjct: 315 YEVEDLVKIADHLANYQIVVWTIDGDGRYVDF 346


>Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical
           protein ZC504.3 protein.
          Length = 668

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 670 FPHKLXQELNMPLTAGTHNTNIINISXVLGYSCNEDI 560
           FP    +E+NM L AG H  NI+N+  +L  S   ++
Sbjct: 344 FPITALREINMLLKAGAHE-NIVNVKEILVGSTKTEV 379


>Z50859-5|CAA90729.1|  135|Caenorhabditis elegans Hypothetical
           protein T26C5.4 protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 227 LLRTRSLHNNSRKCFVDKPKIRXIHCGICLNNPRQT 334
           L RT  +  NSRK      K + +  G+C NN +QT
Sbjct: 23  LCRTECIEQNSRKIVRVHLKDQLVMAGLCNNNTQQT 58


>Z81048-3|CAB02841.1|  407|Caenorhabditis elegans Hypothetical
           protein C41G7.4 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +2

Query: 227 LLRTRSLHNNSRKCFVDKPKIRXIHCGICLNNPRQTSKSN-NTPSPALTSKYQVITDNNS 403
           +L   S  N ++ C + + +   I C  C +NP      N N P   L  K Q +  N+S
Sbjct: 85  VLNPCSARNIAKACIMSQKEENTIRCDCCSSNPIVPCYENENCPCYKLNQKLQGLQINSS 144


>U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical
           protein B0495.2 protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 670 FPHKLXQELNMPLTAGTHNTNIINISXVL 584
           FP    +E+NM L AG H  NI+N+  +L
Sbjct: 396 FPITALREINMLLKAGNH-PNIVNVKEIL 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,785,480
Number of Sequences: 27780
Number of extensions: 230908
Number of successful extensions: 523
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)