Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C18
         (1031 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          45   1e-06
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      45   1e-06
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    30   0.030

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 44.8 bits (101), Expect = 1e-06
 Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
 Frame = +3

Query: 177 DAVFVEKXKKILSFFQDVSQXK-SDDEYYKIGEXYDIEMNMXXYTXXKPXXXFLKMYRTG 353
           D  F+ K KKI      V Q   SD E+Y +G  YD+E NM  Y        FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 354 LMLXIYXFSAFL*XXDGCXYRXHFIXSLNXSXFATFXK 467
           + L        L        R  F    N   F TF K
Sbjct: 89  MFLSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFYK 126


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 44.8 bits (101), Expect = 1e-06
 Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
 Frame = +3

Query: 177 DAVFVEKXKKILSFFQDVSQXK-SDDEYYKIGEXYDIEMNMXXYTXXKPXXXFLKMYRTG 353
           D  F+ K KKI      V Q   SD E+Y +G  YD+E NM  Y        FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 354 LMLXIYXFSAFL*XXDGCXYRXHFIXSLNXSXFATFXK 467
           + L        L        R  F    N   F TF K
Sbjct: 89  MFLSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFYK 126


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 0.030
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 168 KXVDAVFVEKXKKILSFFQDVSQXKSDDEYYKIGEXYDIEMNMXXY 305
           +  D   + K + ++   Q +SQ   + E   +G  YDIE N   Y
Sbjct: 23  RAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESNSHQY 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,095
Number of Sequences: 438
Number of extensions: 2291
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34467615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)