Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C16
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U97008-3|AAB52308.1|  380|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -2

Query: 478 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 305
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 304 IF--VGFH 287
           +F  V +H
Sbjct: 464 LFDLVAYH 471


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -2

Query: 478 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 305
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 304 IF--VGFH 287
           +F  V +H
Sbjct: 464 LFDLVAYH 471


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 280 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 140
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical
           protein T09E11.11 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/65 (21%), Positives = 33/65 (50%)
 Frame = +3

Query: 600 DYVXMMDGCLDEKICYNYGIIKENXQFVXYANYSNSLTYPNNEDXIAYLXEDVGLNAYYY 779
           +++ + D  +   +  + GI++++   V    Y+N    PN +D +A+   D   N Y  
Sbjct: 282 NFITVEDALITGILASDLGIVRKSLPMVFRFQYNN----PNGKDVLAWHMADKSDNEYLN 337

Query: 780 YFHSH 794
           +F+++
Sbjct: 338 FFNNN 342


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 280 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 140
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>U97008-3|AAB52308.1|  380|Caenorhabditis elegans Hypothetical
           protein C03G6.8 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 392 LFKLFYYAKDFECFYKTACYARVYMNQXNVLI-RLLH-SYYPALR 520
           L  +  Y K FECF+K +   R+ + +  +L+ ++LH S+Y   R
Sbjct: 200 LLTITEYIKTFECFHKISSNDRLVLTRHIILMCKILHESHYAVSR 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,102
Number of Sequences: 27780
Number of extensions: 321438
Number of successful extensions: 814
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)