Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C13
(1016 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.064
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.085
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.15
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.20
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.34
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.8
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 3.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 8.5
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.1 bits (72), Expect = 0.064
Identities = 33/138 (23%), Positives = 42/138 (30%), Gaps = 10/138 (7%)
Frame = +1
Query: 619 SPPTRASPKPR---PSXXXXXXSHPXPHLXPXXPPPPPR-------RXXPPXYXXXXXXX 768
+P + SP P PS S P + P PPPPP P Y
Sbjct: 160 APNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAV 219
Query: 769 XXXXXXXXXXXXXXXXPSPPXPPPXHIXSAPSRHIXAPTRLRLPHXLXXCSHXPSSPALP 948
P+PP PPP + + P R + L + P PA P
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Query: 949 XXXXLQXPTRLPHTQTXT 1002
+ PT T T
Sbjct: 280 SQPP-RPPTNASTRSTGT 296
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = +3
Query: 501 STAXPPNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQTPPXXXXXXXXX 680
+T+ P ++ P P P N P S R VSP TP
Sbjct: 180 ATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP- 238
Query: 681 XXXXXXAXXXPPPPPPXXXP 740
PPPPPP P
Sbjct: 239 ----------PPPPPPTLPP 248
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.085
Identities = 29/105 (27%), Positives = 33/105 (31%), Gaps = 2/105 (1%)
Frame = +3
Query: 501 STAXPPNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQTPPXXXXXXXXX 680
S PP P P P + G P P S+R VS P P P
Sbjct: 350 SIPLPPQGRSAPPPPPPRSAPSTGRQP----PPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Query: 681 XXXXXXAXXXPPPPPPXXXPSXLXRXFPXFPPLL--FXXSSXPLP 809
P P PP PS P PP L ++ PLP
Sbjct: 406 LGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 640 PKPRPSXXXXXXSHPXPHLXPXXPPPPPRRXXP 738
P P P S P P PPPPP R P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 621 SPHPGLPQTPPXXXXXXXXXXXXXXXAXXXPPPPPPXXXPS 743
S + LP PP PPPPPP PS
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Score = 26.6 bits (56), Expect = 5.6
Identities = 21/82 (25%), Positives = 24/82 (29%)
Frame = +3
Query: 534 PXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQTPPXXXXXXXXXXXXXXXAXXXP 713
P P P+ P + P S V P LP + P A P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG-APAAP 447
Query: 714 PPPPPXXXPSXLXRXFPXFPPL 779
P PP L P PPL
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPL 469
Score = 26.2 bits (55), Expect = 7.4
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Frame = +1
Query: 628 TRASPKPRPSXXXXXXSHPXPHLXPXXPPPPPR--RXXPPXYXXXXXXXXXXXXXXXXXX 801
T P P PS + P PPPP R R PP
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Query: 802 XXXXXPSPP----XPPPXHIXSAPS 864
P PP PPP SAPS
Sbjct: 347 AAGSIPLPPQGRSAPPPPPPRSAPS 371
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.15
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 864 GRGXXNVXGGGXXX-RGXXXGXGQRRXXRARGGXGGXPGXVXRGXXAAGGGGGXXXREV 691
GRG N GG RG G G+ RGG GG G RG + G GG +V
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG--GRGGSSGGRGGAKGGAKV 73
Score = 30.3 bits (65), Expect = 0.45
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 781 SKGGKXGKX--RXSXEGXKXGGGGGGXXXAXGGXRGG 677
S+GG+ G R G + GG GGG A GG RGG
Sbjct: 7 SRGGRGGSRGGRGGFNGGR-GGFGGGRGGARGGGRGG 42
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 740 GGXXRRGGGGGXXGXRWGXGWEXXXXXXXGRGLGEARVGG 621
G RGG GG G R G G GRG GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = -2
Query: 778 KGGKXGKXRXSXEGXKXGGGG-----GGXXXAXGGXRGG 677
+GG G R G + G GG GG GG +GG
Sbjct: 32 RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 781 SKGGKXGKXRXSXEGXKXGG-GGGGXXXAXGGXRGG 677
S+GG G R G GG GGG + GG RGG
Sbjct: 150 SRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 778 KGGKXGKXRXSXEGXKXGG-GGGGXXXAXGGXRGG 677
+GG+ G R G GG GGG GG RGG
Sbjct: 144 RGGRGGS-RGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 784 KSKGGKXGKXRXSXEGXKXGGGGGGXXXAXGGXRGG 677
K KG + G G GG GG G RGG
Sbjct: 126 KPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGG 161
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 802 GXEEXXKSKGGKXGKXRXSXEGXKXGGGGGGXXXAXGGXRGG 677
G +GG+ G R G + G GG GG RGG
Sbjct: 129 GARNGPAGRGGRGG-FRGGRGGSRGGFGGNSRGGFGGGSRGG 169
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.34
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -3
Query: 864 GRGXXNVXGGGXXXRGXXXGXGQRRXXRARGGXGGXPGXVXRGXXAAGGG-GGXXXREVG 688
G G GG G G G GG GG PG G GGG GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHG--GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 687 XGVGXXG 667
G G G
Sbjct: 254 FGGGPGG 260
Score = 25.8 bits (54), Expect = 9.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 864 GRGXXNVXGGGXXXRGXXXGXGQRRXXRARGGXGGXPGXVXRGXXAAGGGG 712
G G GG G G GG GG PG G GG G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 489 SXTXSTAXPPNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQT 647
S T ST+ PP P+ PP + P P + S+ S P LP T
Sbjct: 284 SCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSP-LPST 335
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 489 SXTXSTAXPPNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHP 632
S T ST+ PP P+ PP + P P + S+ S P
Sbjct: 338 SCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSP 385
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 501 STAXPPNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPG 635
S PP + P PS PP G P P S+ P+PG
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 619 SPPTRASPKPRPSXXXXXXSHPXPHLXPXXPPPPPRRXXPP 741
+PP ++P P P S P P P P PP PP
Sbjct: 1698 APPQMSAPTPPPPPM----SVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 833 PPPXTFXXPLPATSXLPHVCASRTXXXXALTXPPLPLSHXXXPSXPPLA 979
PPP PLPA + + ++ + PP P + PS P A
Sbjct: 285 PPPHGSTTPLPAAASYTSMNMKQSSASHPVLQPPAPSTLQFNPSPSPAA 333
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 646 PRPSXXXXXXSHPXPHLXPXXPPPPPR 726
PRP S P+ P PPPPP+
Sbjct: 149 PRPGTVKSSASPFVPNQNPSAPPPPPQ 175
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 622 PPTRASPKPRPSXXXXXXSHPXPHLXPXXPP--PPPRRXXPP 741
PPT A P+P + P P P P PPP + P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 622 PPTRASPKPRPSXXXXXXSHPXPHLXPXXPPPPPRRXXPP 741
PP+ A P P+PS P P P P P P PP
Sbjct: 1193 PPSEAPPVPKPSVGVPPV--PPPSTAP--PVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 7.4
Identities = 20/103 (19%), Positives = 30/103 (29%)
Frame = +3
Query: 516 PNHGIXPXPXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQTPPXXXXXXXXXXXXXX 695
P+ P P PS P P P + S +P P +
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 696 XAXXXPPPPPPXXXPSXLXRXFPXFPPLLFXXSSXPLPXXXLA 824
PP P P + + PP+ + P+P +A
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
Score = 26.2 bits (55), Expect = 7.4
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +2
Query: 800 PXPXXXPRXXXPPPXTFXXPLPATSXLPHV----CASRTXXXXALTXPPLPLSHXXXPSX 967
P P P P P+PA S P V A+ + PP+P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 968 PPLAFLTPKP 997
PP + P P
Sbjct: 1192 PPPSEAPPVP 1201
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 622 PPTRASPKPRPSXXXXXXSHPXPHLXPXXPPPPP 723
PP A P P+ P P + PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 540 PXPSXPPHAXGXXPNNPYPXAXSARXVSPHPGLPQTPP 653
P PS A N P A A VS +P PP
Sbjct: 1062 PAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPP 1099
Score = 21.4 bits (43), Expect(2) = 8.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 699 AXXXPPPPPP 728
A PPPPPP
Sbjct: 1093 AVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,080,398
Number of Sequences: 5004
Number of extensions: 29064
Number of successful extensions: 212
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 529254290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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