Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C12
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical p...   127   9e-30
Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical pr...   127   9e-30
Z49911-2|CAA90130.1|  681|Caenorhabditis elegans Hypothetical pr...    31   1.5  

>Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  127 bits (307), Expect = 9e-30
 Identities = 63/124 (50%), Positives = 84/124 (67%)
 Frame = +2

Query: 170 LSAQLRRLQSTLXLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKAN 349
           L +   RL STL +AEH+   L+P T N + AA K+G +VSVLV G      AE +AK N
Sbjct: 13  LISNASRLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVN 72

Query: 350 GISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSP 529
           G+ +VLVA+ +  K    E + P+ILA+QKQF FT I A ++AFG+ V+PRVAAKLDVS 
Sbjct: 73  GVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSS 132

Query: 530 ITDI 541
           I+D+
Sbjct: 133 ISDV 136



 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +3

Query: 558 ANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF-PAEPLEGGSAXIDKAPEGDYXTDLVE 734
           A++F RT+YAGNA+  +++  PIK++T RGT+F PA+  EGGS  ++ AP  D  TDL E
Sbjct: 142 ADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAK--EGGSGAVENAPSADIKTDLSE 199

Query: 735 FLKQELTXSDRPXLTXAXNIVS 800
           FL QEL+ S+RP L  A  +VS
Sbjct: 200 FLGQELSKSERPDLATAKVVVS 221


>Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  127 bits (307), Expect = 9e-30
 Identities = 63/124 (50%), Positives = 84/124 (67%)
 Frame = +2

Query: 170 LSAQLRRLQSTLXLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKAN 349
           L +   RL STL +AEH+   L+P T N + AA K+G +VSVLV G      AE +AK N
Sbjct: 13  LISNASRLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVN 72

Query: 350 GISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSP 529
           G+ +VLVA+ +  K    E + P+ILA+QKQF FT I A ++AFG+ V+PRVAAKLDVS 
Sbjct: 73  GVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSS 132

Query: 530 ITDI 541
           I+D+
Sbjct: 133 ISDV 136



 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +3

Query: 558 ANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF-PAEPLEGGSAXIDKAPEGDYXTDLVE 734
           A++F RT+YAGNA+  +++  PIK++T RGT+F PA+  EGGS  ++ AP  D  TDL E
Sbjct: 142 ADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAK--EGGSGAVENAPSADIKTDLSE 199

Query: 735 FLKQELTXSDRPXLTXAXNIVS 800
           FL QEL+ S+RP L  A  +VS
Sbjct: 200 FLGQELSKSERPDLATAKVVVS 221


>Z49911-2|CAA90130.1|  681|Caenorhabditis elegans Hypothetical
           protein M28.2 protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/93 (23%), Positives = 41/93 (44%)
 Frame = +2

Query: 101 IKTDFLNKILLIKMFAPNSRHLFLSAQLRRLQSTLXLAEHNNEVLSPATQNTLNAAKKIG 280
           +K+     +  I+ F  N     +     R+  T  +   +++    +T+ T N   K+ 
Sbjct: 200 VKSSTSQALAEIRSFIKNYAEDVIDGTTTRVGLTA-VNNFDSDAFKRSTEVTYNKGVKLI 258

Query: 281 GDVSVLVAGTKCGPAAESIAKANGISKVLVAES 379
           GD+  L    K GP   + A AN + KV++ +S
Sbjct: 259 GDLQTLQMSPKTGPDCRNTA-ANLLEKVIIIQS 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,618,036
Number of Sequences: 27780
Number of extensions: 357827
Number of successful extensions: 935
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)