Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C11
(949 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.042
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.042
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.042
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 35 0.074
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 35 0.074
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 35 0.074
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 33 0.23
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 33 0.23
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.23
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.52
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.52
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.52
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.8
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.8
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 3.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 8.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 25 9.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP PPP P P AG P PP R + PPP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP R P PP PP A P PPP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP P P G P PP P PPP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPP 303
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 777 PPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXP---PPXPXAGGA 947
PP + PPP + P P AG G PP A P P PP P AGG+
Sbjct: 232 PPAGSPPPPPPPKGSP--PLAG-SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPP 863
PPP PPP R P PP PP
Sbjct: 321 PPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP PPP P P AG P PP R + PPP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP R P PP PP A P PPP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP P P G P PP P PPP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPP 324
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 777 PPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXP---PPXPXAGGA 947
PP + PPP + P P AG G PP A P P PP P AGG+
Sbjct: 253 PPAGSPPPPPPPKGSP--PLAG-SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPP 863
PPP PPP R P PP PP
Sbjct: 342 PPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP PPP P P AG P PP R + PPP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP R P PP PP A P PPP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPP 926
PPP A PPP P P G P PP P PPP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPP 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 777 PPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXP---PPXPXAGGA 947
PP + PPP + P P AG G PP A P P PP P AGG+
Sbjct: 238 PPAGSPPPPPPPKGSP--PLAG-SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPP 863
PPP PPP R P PP PP
Sbjct: 327 PPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 35.1 bits (77), Expect = 0.074
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PPP G H PP P GA PPPP P
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 35.1 bits (77), Expect = 0.074
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PPP G H PP P GA PPPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 35.1 bits (77), Expect = 0.074
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PPP G H PP P GA PPPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGG 776
PAP G GGG G A GG GG G G GGG GG
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 946 APPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
APP GGG G GG GG G G GGG GGG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 931 GXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
G GGG G GG GG G G GGG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXP----GGPAXGXXGXXRXGGGRXXAXX 782
PAP G GGG G GG GG G G GGG
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Query: 781 GGG 773
GGG
Sbjct: 136 GGG 138
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGG 776
PAP G GGG G A GG GG G G GGG GG
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 946 APPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
APP GGG G GG GG G G GGG GGG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 931 GXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
G GGG G GG GG G G GGG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXP----GGPAXGXXGXXRXGGGRXXAXX 782
PAP G GGG G GG GG G G GGG
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Query: 781 GGG 773
GGG
Sbjct: 136 GGG 138
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGG 776
PA A G GGG G GG PGG A G G G GR GG
Sbjct: 496 PAAGA-GAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGG 552
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 949 PAPPAXGXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGG 776
PA A G GGG G GG PGG A G G G GR GG
Sbjct: 496 PAAGA-GAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGG 552
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/84 (22%), Positives = 24/84 (28%)
Frame = -1
Query: 484 KXPXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGPRXXXXXXXXXXXXXXX 305
K P PPP GP + + + P P + PPPP
Sbjct: 506 KSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Query: 304 XXPXEXKSSGXXRPPPPXGXXAAP 233
+ S PPPP P
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGP 589
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P+ PP P GG PPPP G
Sbjct: 559 PIPPPPPPPLPQ-NLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPPXPXAGG 944
PPP PP P P PPG PP P PPP P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPP-PPPPPPGGCPPPPPPPPPGG 779
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PP GP G PP P G K PPP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXA 875
PPP PPP P GPP PP A
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P P P GG PPPP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P + G PP P G PPPP G
Sbjct: 742 PPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPPXPXAGG 944
PPP PP P P PPG PP P PPP P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPP-PPPPPPGGCPPPPPPPPPGG 779
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PP GP G PP P G K PPP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXA 875
PPP PPP P GPP PP A
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P P P GG PPPP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P + G PP P G PPPP G
Sbjct: 742 PPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPPXPXAGG 944
PPP PP P P PPG PP P PPP P GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPP-PPPPPPGGCPPPPPPPPPGG 362
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P PP GP G PP P G K PPP P
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXA 875
PPP PPP P GPP PP A
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 377
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P P P GG PPPP G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXG 356
P PPP P + G PP P G PPPP G
Sbjct: 325 PPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPG 361
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Frame = -1
Query: 949 PAPPAXGXG-----GGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAX 785
P PPA G G GG G GG GG G G GGG
Sbjct: 113 PPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Query: 784 XGGG 773
GGG
Sbjct: 173 GGGG 176
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXR 869
PPP PPP P GPP PP R
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXR 869
PPP PPP P GPP PP R
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 931 GXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
G GGG G GG GP+ G G GGG GGG
Sbjct: 195 GYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGG 247
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 931 GXGGGXGAXXXXXXXXRXXAXRXGGXXPGGPAXGXXGXXRXGGGRXXAXXGGG 773
G GG G R GG GG G G GGG GGG
Sbjct: 73 GNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 478 PXXPPPXXXGP-EXQXKHTXGDPPXXPXXXGGAXKXPPPPXGP 353
P P GP + + + DPP P G + PP P GP
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP 263
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPPXP 932
PPP PPP P P PP PP R P PPP P
Sbjct: 41 PPPWHRNRGPPP--FGPPPPWDRPP---PPWRRPPWHRRPPWGLPPPPPPPEP 88
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/84 (26%), Positives = 25/84 (29%)
Frame = +3
Query: 228 PXGAAXXPXGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXRGPXGGGGXFXAPPXXXGX 407
P G+A GGGG GP GGGG G
Sbjct: 284 PSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGG---GGAKSGGG 340
Query: 408 SGGSPXVCXFXXSGPXXXGGGXXG 479
GG P + +G GGG G
Sbjct: 341 GGGIPGQSVYMGAGGGGGGGGGGG 364
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPPG--XXPPXR-XAXXRXXXXXXXXAPXPPPXP 932
PPP PPP P P PP PP + +P PPP P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXX----PXAGPPG--XXPPXRXAXXRXXXXXXXXAPXPPPXPX 935
P P PPP P P +GPPG PP + P PP P
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG 418
Query: 936 AGGA 947
A G+
Sbjct: 419 APGS 422
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -1
Query: 478 PXXPPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPPXGPRXXXXXXXXXXXXXXXXX 299
P P P P PP P G PPP GP
Sbjct: 686 PGQPRPAGLPPGVPPMFNLNAPPP-PGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPP 744
Query: 298 PXEXKSSGXXRPPPPXGXXAAPXGXF 221
P + PPPP G A P F
Sbjct: 745 PMFQQGFNAGAPPPPFGRGAGPMSSF 770
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 801 PPPXRXXPXXPXAGPPGXXPPXRXAXXRXXXXXXXXAPXPPPXP 932
PPP P A PP PP + P PPP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPP-GXXPPXRXAXXRXXXXXXXXAPXPP 923
PP PPP P GPP G PP R P PP
Sbjct: 308 PPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGPP-GXXPPXRXAXXRXXXXXXXXAPXPP 923
PP PPP P GPP G PP R P PP
Sbjct: 308 PPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGP--PGXXPPXRXAXXRXXXXXXXXAPXPPPXPXAGG 944
PPP + PPP P P PG PP + P PP GG
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +3
Query: 774 PPPXXAXXRPPPXRXXPXXPXAGP--PGXXPPXRXAXXRXXXXXXXXAPXPPPXPXAGG 944
PPP + PPP P P PG PP + P PP GG
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = -1
Query: 469 PPPXXXGPEXQXKHTXGD---PPXXPXXXGGAXKXPPPPXG 356
PPP GP + G PP P G PPPP G
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYALPPPPPNG 68
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 421 GDPPXXPXXXGGAXKXPPPPXGP 353
G PP GG PPPP GP
Sbjct: 34 GPPPACGNPCGGGFGPPPPPFGP 56
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 25.4 bits (53), Expect(2) = 9.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 469 PPPXXXGPEXQXKHTXGDPPXXPXXXGGAXKXPPPP 362
PPP G G PP P GG PPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGI--PPPPP 99
Score = 21.0 bits (42), Expect(2) = 9.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 265 PPPPXGXXAAP 233
PPPP G AP
Sbjct: 117 PPPPSGLGVAP 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,478,873
Number of Sequences: 27780
Number of extensions: 232816
Number of successful extensions: 1555
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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