Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C08
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 288 3e-78
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 283 2e-76
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 263 1e-70
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 116 1e-45
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469... 29 3.6
12_02_0316 + 17432346-17432520,17432604-17433211 29 6.3
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 6.3
02_05_0979 + 33268294-33269595 29 6.3
03_05_0620 - 26196597-26196841,26196929-26197020,26197118-26197296 28 8.3
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 288 bits (707), Expect = 3e-78
Identities = 136/218 (62%), Positives = 166/218 (76%), Gaps = 1/218 (0%)
Frame = +2
Query: 182 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 361
DEMTRI W IK+KLI PFLD+++ YDLG+ +RD TDD+VT++ AEA KYNV IKCAT
Sbjct: 18 DEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAEATLKYNVAIKCAT 77
Query: 362 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 541
ITPDE RV+EF LK+MWKSPNGTIRNI+ GTVFRE IICKN+PRLV GW KPI IGRHA
Sbjct: 78 ITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVPGWTKPICIGRHAF 137
Query: 542 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-GVXLAMFXTDASIIDFAHSS 718
DQY+ATD V+ G G L+++F+ + E I V + GA GV L+M+ TD SI FA +S
Sbjct: 138 GDQYRATDAVLKGPGKLKLVFEGKD-EQIDLEVFNFTGAGGVALSMYNTDESIRAFAEAS 196
Query: 719 FKFALDRKYPLYLXTXNTILXKYDGRFXDXFQDIYDXG 832
A ++K+PLYL T NTIL KYDGRF D FQ++Y+ G
Sbjct: 197 MTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAG 234
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 283 bits (693), Expect = 2e-76
Identities = 132/216 (61%), Positives = 164/216 (75%), Gaps = 1/216 (0%)
Frame = +2
Query: 182 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 361
DEMTR+ W IK+KLI PFL++++ +DLG+ RD+TDD+VT++ AEA KYNV IKCAT
Sbjct: 18 DEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAAEATLKYNVAIKCAT 77
Query: 362 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 541
ITPDE RV+EF LK MWKSPNGTIRNIL GTVFRE IICKNIPRLV GW KPI IGRHA
Sbjct: 78 ITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWTKPICIGRHAF 137
Query: 542 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-GVXLAMFXTDASIIDFAHSS 718
DQY+ATD V+ G G L+++++ + E I+ V + GA GV +M+ TD SI FA +S
Sbjct: 138 GDQYRATDAVIKGPGKLKLVYEGKD-EEIELEVFNFTGAGGVAQSMYNTDESIRSFAEAS 196
Query: 719 FKFALDRKYPLYLXTXNTILXKYDGRFXDXFQDIYD 826
A ++K+PLYL T NTIL KYDGRF D FQ++Y+
Sbjct: 197 MATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYE 232
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 263 bits (645), Expect = 1e-70
Identities = 136/234 (58%), Positives = 160/234 (68%), Gaps = 19/234 (8%)
Frame = +2
Query: 182 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 361
DEMTR+IW IK+KLI PFLD+++ YDLG+ NRD T D+VTI+ AEA KYNV IKCAT
Sbjct: 43 DEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEATLKYNVAIKCAT 102
Query: 362 ITP------------------DEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNI 487
ITP DE RV+EF L MWKSPNGTIRNIL GTVFRE IICKNI
Sbjct: 103 ITPVLDTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKNI 162
Query: 488 PRLVTGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-GV 664
PRLV GW KPI IGRHA DQY+ATD V+ G G L+++F E I+ V + GA GV
Sbjct: 163 PRLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKLKLVFDGRE-EQIELDVFNFTGAGGV 221
Query: 665 XLAMFXTDASIIDFAHSSFKFALDRKYPLYLXTXNTILXKYDGRFXDXFQDIYD 826
L+M+ TD SI FA +S A +++PLYL T NTIL KYDGRF D FQ+ Y+
Sbjct: 222 ALSMYNTDESIWAFAEASMNMAYQKRWPLYLSTKNTILKKYDGRFKDIFQENYE 275
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 116 bits (279), Expect(2) = 1e-45
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +2
Query: 218 EKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFK 397
+ LI P+L++++ +DLG+ NRD TDD+VT++ AEA T+T DE RV+EFK
Sbjct: 99 DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEATLDLYSNSFFMTLT-DETRVKEFK 157
Query: 398 LKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 502
LK MW+SPNGTIRNIL GTVFRE I+CKN+PR+++
Sbjct: 158 LKSMWRSPNGTIRNILNGTVFREPILCKNVPRILS 192
Score = 85.4 bits (202), Expect(2) = 1e-45
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 596 IIFKPESGEAIKHVVHEYKGAGVXLAMFXTDASIIDFAHSSFKFALDRKYPLYLXTXNTI 775
I+ P+ E ++ V+ +KG GV L+M+ D SI FA SS AL +K+PLYL T NTI
Sbjct: 190 ILSVPDGAEPVELNVYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTI 249
Query: 776 LXKYDGRFXDXFQDIYD 826
L KYDGRF D FQ++Y+
Sbjct: 250 LKKYDGRFKDIFQEVYE 266
>02_05_0597 +
30245455-30245767,30246693-30246760,30246851-30246939,
30247047-30247212,30247296-30247585,30247692-30247896,
30248013-30248170,30248352-30248595
Length = 510
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -1
Query: 513 LSHPVTSLGIFLQIIASLKTVPPRILRMVPLGLFH 409
+ H +TSL ++I L+ +PPR+ R V LG+FH
Sbjct: 165 VEHFITSLRDEVRI---LRELPPRVKRRVELGMFH 196
>12_02_0316 + 17432346-17432520,17432604-17433211
Length = 260
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 500 TGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIF-KPESGEAIKHVVHEYKGAGVXLA 673
TG +KP+ + A A + +A VV +L KP +G+ V+HEY+ AG LA
Sbjct: 93 TGKEKPVAVSVAA-APRSQAAAVVVGMKRSLVFYRGKPPTGKKTDWVMHEYRLAGAGLA 150
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 395 KLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDK 514
K++ W+ P I VFR NIP TGWDK
Sbjct: 69 KMEAFWRVPKWKIEKAKVKVVFRLQFHATNIPS--TGWDK 106
>02_05_0979 + 33268294-33269595
Length = 433
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 575 PGAGTLEIIFKPESGEAIKHVVHEYKGAGV-XLAMFXTDASIIDFAHSSFKFA 730
P GTLEIIF PE EA+ H+Y V L +F +++ + F+
Sbjct: 381 PSVGTLEIIFSPED-EAVGE-YHDYSNNEVSTLGLFEESLALVGNTSENIVFS 431
>03_05_0620 - 26196597-26196841,26196929-26197020,26197118-26197296
Length = 171
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 608 PESGEAIKHVVHEYKGAGVXLAMFXTDASIIDFAHSSFKFAL 733
P SG A+KH + GAGV A + +I F HS FA+
Sbjct: 92 PRSGLALKHSIDV--GAGVIDADYRGPVGVILFNHSDTDFAV 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,069,868
Number of Sequences: 37544
Number of extensions: 403300
Number of successful extensions: 905
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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