Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C08
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   340   9e-94
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   302   2e-82
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    29   5.6  
X75331-1|CAA53080.1|  620|Caenorhabditis elegans acetylcholinest...    29   5.6  
U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal acetyl...    29   5.6  
U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical pr...    29   5.6  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  340 bits (835), Expect = 9e-94
 Identities = 159/215 (73%), Positives = 178/215 (82%), Gaps = 1/215 (0%)
 Frame = +2

Query: 182 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 361
           DEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A  KYNV +KCAT
Sbjct: 17  DEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCAT 76

Query: 362 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 541
           ITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV  W KPIIIGRHAH
Sbjct: 77  ITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAH 136

Query: 542 ADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVXLAMFXTDASIIDFAHSS 718
           ADQYKATDFVVPGAG LEI F    G + I+  V ++KG GV L+M+ TD SI DFAH+S
Sbjct: 137 ADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFAHAS 196

Query: 719 FKFALDRKYPLYLXTXNTILXKYDGRFXDXFQDIY 823
           FK+AL RK+PLYL T NTIL KYDGRF D F +IY
Sbjct: 197 FKYALQRKFPLYLSTKNTILKKYDGRFKDIFAEIY 231


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  302 bits (742), Expect = 2e-82
 Identities = 140/216 (64%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
 Frame = +2

Query: 182 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 361
           DEMTRIIW  IK KLILP+LD+++  YDLG+E RD+T+DQVTID A AI +++VGIKCAT
Sbjct: 39  DEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCAT 98

Query: 362 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 541
           ITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA 
Sbjct: 99  ITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAF 158

Query: 542 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVXLAMFXTDASIIDFAHSS 718
            DQYK TD V+P   TL+++     G    H V+++ K  GV LAM+ TD SI  FAHS 
Sbjct: 159 GDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSC 218

Query: 719 FKFALDRKYPLYLXTXNTILXKYDGRFXDXFQDIYD 826
           F++AL +++PLYL T NTIL KYDGRF D FQDIY+
Sbjct: 219 FQYALMKQWPLYLSTKNTILKKYDGRFKDIFQDIYE 254


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 233  PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 412
            P +D    V ++    R +   +  +      KK+    +  T+ PDE+ VE  KL K  
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233

Query: 413  KSPNGTIRNI 442
            + PN T+R +
Sbjct: 2234 RLPNATLREV 2243


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -3

Query: 391 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 272
           F+NSL I S   TF    +F+   STI+ + +I LI IFH
Sbjct: 59  FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93


>X75331-1|CAA53080.1|  620|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 329 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 219
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal
           acetylcholinesterase protein1 protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 329 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 219
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical
           protein T08A9.13 protein.
          Length = 120

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 272 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 406
           ++   + + +  ++C +A+ +Y+V  K  T+T  E++  E   KK
Sbjct: 44  LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,883
Number of Sequences: 27780
Number of extensions: 368270
Number of successful extensions: 898
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)