Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C06
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132655-4|CAM28314.1| 112|Homo sapiens GNAS complex locus prot... 32 2.5
AL132655-3|CAM28313.1| 166|Homo sapiens GNAS complex locus prot... 32 2.5
AL132655-2|CAC07996.1| 245|Homo sapiens GNAS complex locus prot... 32 2.5
AJ251760-1|CAB83214.1| 245|Homo sapiens neuroendocrine secretor... 32 2.5
AJ009849-1|CAA08889.1| 245|Homo sapiens neuroendocrine secretor... 32 2.5
AF105253-1|AAF63226.1| 245|Homo sapiens neuroendocrine secretor... 32 2.5
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 31 4.4
BC146824-1|AAI46825.1| 788|Homo sapiens Unknown (protein for IM... 31 5.8
U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar traffi... 31 7.6
U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome... 31 7.6
U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein. 31 7.6
U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein. 31 7.6
L42025-1|AAC37580.1| 562|Homo sapiens RAB protein. 31 7.6
L35240-1|AAC37565.1| 455|Homo sapiens enigma protein protein. 31 7.6
BC096275-1|AAH96275.1| 562|Homo sapiens HIV-1 Rev binding prote... 31 7.6
BC096274-1|AAH96274.1| 522|Homo sapiens HRB protein protein. 31 7.6
BC096273-1|AAH96273.1| 562|Homo sapiens HIV-1 Rev binding prote... 31 7.6
BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding prote... 31 7.6
BC033093-1|AAH33093.1| 958|Homo sapiens Treacher Collins-France... 31 7.6
BC030592-1|AAH30592.1| 562|Homo sapiens HIV-1 Rev binding prote... 31 7.6
BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein. 31 7.6
BC016144-1|AAH16144.1| 1414|Homo sapiens Unknown (protein for IM... 31 7.6
BC014559-1|AAH14559.1| 958|Homo sapiens Treacher Collins-France... 31 7.6
BC011764-1|AAH11764.1| 958|Homo sapiens Treacher Collins-France... 31 7.6
AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform p... 31 7.6
AC105286-1|AAX93270.1| 506|Homo sapiens unknown protein. 31 7.6
AB209317-1|BAD92554.1| 712|Homo sapiens TCOF1 protein variant p... 31 7.6
>AL132655-4|CAM28314.1| 112|Homo sapiens GNAS complex locus
protein.
Length = 112
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 76 EPKEEKQRRRCKPKKPTRRDASPESPSKK 104
>AL132655-3|CAM28313.1| 166|Homo sapiens GNAS complex locus
protein.
Length = 166
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 130 EPKEEKQRRRCKPKKPTRRDASPESPSKK 158
>AL132655-2|CAC07996.1| 245|Homo sapiens GNAS complex locus
protein.
Length = 245
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 209 EPKEEKQRRRCKPKKPTRRDASPESPSKK 237
>AJ251760-1|CAB83214.1| 245|Homo sapiens neuroendocrine secretory
protein 55 protein.
Length = 245
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 209 EPKEEKQRRRCKPKKPTRRDASPESPSKK 237
>AJ009849-1|CAA08889.1| 245|Homo sapiens neuroendocrine secretory
protein 55 (NESP55) protein.
Length = 245
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 209 EPKEEKQRRRCKPKKPTRRDASPESPSKK 237
>AF105253-1|AAF63226.1| 245|Homo sapiens neuroendocrine secretory
protein 55 protein.
Length = 245
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 603 QPKDSKWKSRCKPADPPRPHHQPSSPDSR 517
+PK+ K + RCKP P R P SP +
Sbjct: 209 EPKEEKQRRRCKPKKPTRRDASPESPSKK 237
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 31.5 bits (68), Expect = 4.4
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = -1
Query: 663 VHRDRPTXXGQGXTTQPHGAQPKDSKWKSRCKPADPPRPHHQP---SSPDSRRHRTRINS 493
VH+D+ Q + P AQP+ ++ +R +P P+ QP + P+ + T +
Sbjct: 2110 VHQDKTLPPAQSSSVGPAKAQPQTAQPSARPQPQTQPQSPAQPEVQTQPEVQTQTTVSSH 2169
Query: 492 VDQGSDVHALRSAFVQVALVESPEES 415
V + +S+ QVA P+ +
Sbjct: 2170 VPSEAQPTHAQSSKPQVAAQSQPQSN 2195
>BC146824-1|AAI46825.1| 788|Homo sapiens Unknown (protein for
IMAGE:8860452) protein.
Length = 788
Score = 31.1 bits (67), Expect = 5.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 244 STSSCSKSWTACAPISVGSAALPPGSATKPISHHLQA 354
+ SS S + CAP + +AA+PP +A HH A
Sbjct: 303 AASSASGGSSCCAPPAAAAAAVPPAAAANHHHHHHHA 339
>U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar
trafficking phosphoprotein protein.
Length = 1411
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 362 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 419
>U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome
protein.
Length = 1411
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 362 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 419
>U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 362 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 419
>U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 362 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 419
>L42025-1|AAC37580.1| 562|Homo sapiens RAB protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 352 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 410
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 411 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 452
>L35240-1|AAC37565.1| 455|Homo sapiens enigma protein protein.
Length = 455
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 606 AQPKDSKWKSRCKP-ADPPRPHHQPSSPDSRR 514
AQP SK + P ADPPR P+SP +RR
Sbjct: 84 AQPVQSKPQKASAPAADPPRTPLHPASPSTRR 115
>BC096275-1|AAH96275.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 352 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 410
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 411 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 452
>BC096274-1|AAH96274.1| 522|Homo sapiens HRB protein protein.
Length = 522
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 312 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 370
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 371 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 412
>BC096273-1|AAH96273.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 352 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 410
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 411 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 452
>BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 560
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 352 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 410
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 411 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 452
>BC033093-1|AAH33093.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 439 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496
>BC030592-1|AAH30592.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 352 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 410
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 411 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 452
>BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein.
Length = 1126
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 347 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 404
>BC016144-1|AAH16144.1| 1414|Homo sapiens Unknown (protein for
IMAGE:3921754) protein.
Length = 1414
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 439 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496
>BC014559-1|AAH14559.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 439 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496
>BC011764-1|AAH11764.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 439 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496
>AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform
protein.
Length = 1488
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 439 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496
>AC105286-1|AAX93270.1| 506|Homo sapiens unknown protein.
Length = 506
Score = 30.7 bits (66), Expect = 7.6
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SASAQVASHSGVDSER-ANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPIS 291
+ A V S V S+ A+S A + + AA +NAY STS+ S + P+
Sbjct: 296 TGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPV- 354
Query: 292 VGSAALPPGSATKPISHHLQARRSCVDATAKPSFGVTVRRFR 417
V SA P S++ P + A A PS + F+
Sbjct: 355 VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQ 396
>AB209317-1|BAD92554.1| 712|Homo sapiens TCOF1 protein variant
protein.
Length = 712
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 ASAPALXRPGRHAEPHPPLLC-QERVRVRAGGLPQRSRQRASELDDDRPSSADVAVRQ 212
ASAPA P + A P PP +V+ G + SR + E D DR + A + Q
Sbjct: 39 ASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,461,387
Number of Sequences: 237096
Number of extensions: 2224061
Number of successful extensions: 8610
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8593
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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