Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_C05
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   191   9e-49
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   191   9e-49
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   191   9e-49
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   191   9e-49
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   191   9e-49
BT029103-1|ABJ17036.1|  823|Drosophila melanogaster IP14290p pro...    31   2.8  
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA...    31   2.8  

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  191 bits (466), Expect = 9e-49
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 217 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 396
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 397 KQTRAGQRTRFKAFVAIGDNXGHIGLGVKCSKEVATAIRG 516
           KQTRAGQRTRFKAFVAIGDN GHIGLGVKCSKEVATAIRG
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136



 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +2

Query: 548 PVRRGXWGXXIGKPXXVPCKVXGQCGSVTV 637
           PVRRG WG  IGKP  VPCKV G+CGSV+V
Sbjct: 147 PVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  191 bits (466), Expect = 9e-49
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 217 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 396
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 397 KQTRAGQRTRFKAFVAIGDNXGHIGLGVKCSKEVATAIRG 516
           KQTRAGQRTRFKAFVAIGDN GHIGLGVKCSKEVATAIRG
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136



 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +2

Query: 548 PVRRGXWGXXIGKPXXVPCKVXGQCGSVTV 637
           PVRRG WG  IGKP  VPCKV G+CGSV+V
Sbjct: 147 PVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  191 bits (466), Expect = 9e-49
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 217 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 396
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 397 KQTRAGQRTRFKAFVAIGDNXGHIGLGVKCSKEVATAIRG 516
           KQTRAGQRTRFKAFVAIGDN GHIGLGVKCSKEVATAIRG
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136



 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +2

Query: 548 PVRRGXWGXXIGKPXXVPCKVXGQCGSVTV 637
           PVRRG WG  IGKP  VPCKV G+CGSV+V
Sbjct: 147 PVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  191 bits (466), Expect = 9e-49
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 217 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 396
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 397 KQTRAGQRTRFKAFVAIGDNXGHIGLGVKCSKEVATAIRG 516
           KQTRAGQRTRFKAFVAIGDN GHIGLGVKCSKEVATAIRG
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136



 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +2

Query: 548 PVRRGXWGXXIGKPXXVPCKVXGQCGSVTV 637
           PVRRG WG  IGKP  VPCKV G+CGSV+V
Sbjct: 147 PVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  191 bits (466), Expect = 9e-49
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 217 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 396
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 397 KQTRAGQRTRFKAFVAIGDNXGHIGLGVKCSKEVATAIRG 516
           KQTRAGQRTRFKAFVAIGDN GHIGLGVKCSKEVATAIRG
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 136



 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = +2

Query: 548 PVRRGXWGXXIGKPXXVPCKVXGQCGSVTV 637
           PVRRG WG  IGKP  VPCKV G+CGSV+V
Sbjct: 147 PVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176


>BT029103-1|ABJ17036.1|  823|Drosophila melanogaster IP14290p
           protein.
          Length = 823

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 223 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 80
           L C  H    D  R+H  ++GL +  V+ + REN   VH + ++  LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407


>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
           protein.
          Length = 1958

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 223 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 80
           L C  H    D  R+H  ++GL +  V+ + REN   VH + ++  LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,324,953
Number of Sequences: 53049
Number of extensions: 643098
Number of successful extensions: 2687
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2190
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)