Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C04
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 174 8e-44
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 174 8e-44
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 174 8e-44
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 174 8e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 174 8e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 174 8e-44
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 174 8e-44
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 174 8e-44
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 174 8e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 174 8e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 2e-43
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 105 3e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 80 2e-15
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 75 9e-14
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 9e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.089
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.089
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.63
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.63
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.63
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.63
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.63
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 7.8
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 174 bits (423), Expect = 8e-44
Identities = 80/97 (82%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 103 VLLTEAPLNPKSNREKM-TQIMFETFNTPAMYVNIQA 138
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +1
Query: 118 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYV + LSLYASGRT GIVLD+GDGV+HTVPIY GYALPHA
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHA 174
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT GIVLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT GIVLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 90 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 125
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 161
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 166 KAGFAGDDAPRAVFPSIVGRPRHQG 240
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 174 bits (423), Expect = 8e-44
Identities = 81/97 (83%), Positives = 85/97 (87%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 421
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 422 VLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
VLLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 139
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (419), Expect = 2e-43
Identities = 80/96 (83%), Positives = 84/96 (87%)
Frame = +2
Query: 245 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 424
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 425 LLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
LLTEAPLNPK + + IMFETFN+P IQA
Sbjct: 61 LLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQA 95
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P MYVA + LSLYASGRT G+VLDSGDGV+HTVPIY GYALPHA
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 131
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 105 bits (253), Expect = 3e-23
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 418
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 419 PVLLTEAPLNPKGQQGRR*PXIMFETFNSPXHVRRIQA 532
PVLLT+APLNP + R I FETFN P ++QA
Sbjct: 106 PVLLTDAPLNPLKNRERS-AEIFFETFNVPALYIQMQA 142
Score = 64.9 bits (151), Expect = 7e-11
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P +Y+ + LSLYA+GRT G+VLDSGDGV+H VPI G+A+ HA
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHA 178
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +1
Query: 118 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 234
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 370
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 361
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 370
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 240
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 370
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 80.2 bits (189), Expect = 2e-15
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +2
Query: 242 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 418
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 419 PVLLTEAPLN-PKGQQGRR*PXIMFETFNSPXHVRRIQA 532
LLTE PLN P+ ++ IMFE+FN P +QA
Sbjct: 116 FFLLTEPPLNTPENREYT--AEIMFESFNVPGLYIAVQA 152
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTX--------GIVLDSGDGVSHTVPIYXGYAL 632
P +Y+A + L+L AS + G+V+DSGDGV+H +P+ GY +
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVI 193
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 112 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 74.5 bits (175), Expect = 9e-14
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 179 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 358
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 359 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKGQQGRR*PXIMFETF 499
M +W HTF E L + P+E +LLTE PLNP + + +MFE +
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKM-FQVMFEQY 131
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 513 MYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPH 638
+YVA + L+LYA G G+V+DSGDGV+H P+Y G+AL H
Sbjct: 136 IYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHH 177
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +2
Query: 326 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PXIMFETFNS 505
++ G+I +W+ EKI H++ N L P EHPVL +E+ N + ++ + IMFE F
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR-EKLTEIMFEKFQV 152
Query: 506 PXH 514
P +
Sbjct: 153 PAY 155
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 507 PXMYVASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
P Y++ LS +A GRT G+++DSG + VP++ GYA+ HA
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHA 197
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 121 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 385
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 260 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 385
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 519 VASRPXLSLYASGRTXGIVLDSGDGVSHTVPIYXGYALPHA 641
+ +P L LYA T G+V+D G+ V + VP+ GY + A
Sbjct: 307 ITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESA 346
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 719 PPPPLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLPXXLXTP 850
PPPP+ PP M P P CPPPP P +P
Sbjct: 46 PPPPICPPQFCP---PPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 719 PPPPLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLP 832
PPPP+ + V + P PL AP PPPP P
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 719 PPPPLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLP 832
PPPP+ + V + P PL AP PPPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 719 PPPPLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLP 832
PPPP+ + V + P PL AP PPPP P
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 143 STMAPACARPVSPATTRPAPSSRP 214
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 290 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 156
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 290 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 156
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 290 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 156
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 290 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 156
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 290 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 177
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +2
Query: 716 RPPP---PLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLPXXLXTPXXXXXTP 871
RP P P + + PPA AP CPPPP P P TP
Sbjct: 75 RPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 308 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 156
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 226 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 345
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 719 PPPPLTXXSXVXSRXPPAMFPLXFXXXXAPXCPPPPLPXXLXTPXXXXXTP 871
PPPP + + PP P AP PPPP+ L TP TP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAP--PPPPI-LGLKTPSKSLKTP 116
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 134 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 238
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,003,458
Number of Sequences: 27780
Number of extensions: 397671
Number of successful extensions: 1995
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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