Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C03
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 97 2e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 97 2e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 96 3e-20
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 63 2e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 63 2e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 40 0.003
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 40 0.003
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 40 0.003
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 40 0.003
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 39 0.004
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 39 0.004
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 39 0.004
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 39 0.004
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 39 0.005
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 39 0.005
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 38 0.009
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 38 0.009
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 38 0.009
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 3.3
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 3.3
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 96.7 bits (230), Expect = 2e-20
Identities = 51/92 (55%), Positives = 54/92 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VRSG +G LFRPD +VFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
LTHSL G G LISKIREE PDRIMN
Sbjct: 135 LTHSLGGGTGSGMG-TLLISKIREEYPDRIMN 165
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG G+ FWE S GIDP+G Y G S LQLER +VYY A
Sbjct: 5 VHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG------SNK 58
Query: 335 XVPRAILLDLE 367
VPRA+L+DLE
Sbjct: 59 YVPRAVLVDLE 69
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT T+C DNE LY I + K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTP 220
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 96.7 bits (230), Expect = 2e-20
Identities = 51/92 (55%), Positives = 54/92 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VRSG +G LFRPD +VFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
LTHSL G G LISKIREE PDRIMN
Sbjct: 135 LTHSLGGGTGSGMG-TLLISKIREEYPDRIMN 165
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG G+ FWE S GIDP+G Y G S LQLER +VYY A
Sbjct: 5 VHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG------SNK 58
Query: 335 XVPRAILLDLE 367
VPRA+L+DLE
Sbjct: 59 YVPRAVLVDLE 69
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT T+C DNE LY I + K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTP 220
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/92 (55%), Positives = 54/92 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VRSG +G LFRPD FVFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
LTHSL G G LISKIREE PDRIM+
Sbjct: 135 LTHSLGGGTGSGMG-TLLISKIREEFPDRIMS 165
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/71 (47%), Positives = 41/71 (57%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG G+ FWE S GI P G ++G S LQLER VYY A+ G
Sbjct: 5 VHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN------NGK 58
Query: 335 XVPRAILLDLE 367
VPRA+L+DLE
Sbjct: 59 YVPRAVLVDLE 69
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/50 (48%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT TYC DNE LY I Y K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNP 220
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/92 (55%), Positives = 54/92 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VRSG +G LFRPD FVFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
LTHSL G G LISKIREE PDRIM+
Sbjct: 135 LTHSLGGGTGSGMG-TLLISKIREEYPDRIMS 165
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG GA FWE S GI P G Y+G S LQLER +VYY A+ GG
Sbjct: 5 VHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN------GGK 58
Query: 335 XVPRAILLDLE 367
VPRA+L+DLE
Sbjct: 59 YVPRAVLVDLE 69
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT T+C DNE LY I + K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNP 220
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/92 (55%), Positives = 54/92 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VRSG +G LFRPD FVFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
LTHSL G G LISKIREE PDRIM+
Sbjct: 135 LTHSLGGGTGSGMG-TLLISKIREEYPDRIMS 165
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG G+ FWE S GI P G ++G + LQLER VYY A+ G
Sbjct: 5 VHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN------NGK 58
Query: 335 XVPRAILLDLE 367
VPRA+L+DLE
Sbjct: 59 YVPRAVLVDLE 69
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/50 (48%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT TYC DNE LY I Y K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNP 220
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 93.5 bits (222), Expect = 2e-19
Identities = 49/91 (53%), Positives = 53/91 (58%)
Frame = +3
Query: 384 AVRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFX 563
+VR+G +G LFRPD FVFG SGAGN WAKG Y EG R CLQ F
Sbjct: 75 SVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQ 134
Query: 564 LTHSLXGXXRFRXGXPSLISKIREEXPDRIM 656
+THSL G G LISKIREE PDRIM
Sbjct: 135 MTHSLGGGTGSGMG-TLLISKIREEYPDRIM 164
Score = 76.2 bits (179), Expect = 3e-14
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + AG CG GA FWE S GIDPTG Y G S LQLER +VYY AS GG
Sbjct: 5 VHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS------GGK 58
Query: 335 XVPRAILLDLE 367
VPRA L+DLE
Sbjct: 59 YVPRACLVDLE 69
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P PK V PYN LVENT T+C DNE LY I + K+ P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTP 220
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/91 (39%), Positives = 45/91 (49%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
VRS YG LF P+ V G SGAGN W++G Y +G R L+ F L
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 567 THSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
HSL G G LISK+REE D+ ++
Sbjct: 136 IHSLGGGTGSGLG-SLLISKLREEYSDKTLS 165
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G CG GA FWE S G+ G Y+G + QLER + YY G
Sbjct: 5 INVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME------GRK 58
Query: 335 XVPRAILLDLE 367
VPRAIL+DL+
Sbjct: 59 YVPRAILVDLD 69
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKV 816
P K V PYN P L++N +C DNE ++ I K+
Sbjct: 171 PSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/91 (39%), Positives = 45/91 (49%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
VRS YG LF P+ V G SGAGN W++G Y +G R L+ F L
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 567 THSLXGXXRFRXGXPSLISKIREEXPDRIMN 659
HSL G G LISK+REE D+ ++
Sbjct: 136 IHSLGGGTGSGLG-SLLISKLREEYSDKTLS 165
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G CG GA FWE S G+ G Y+G + QLER + YY G
Sbjct: 5 INVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME------GRK 58
Query: 335 XVPRAILLDLE 367
VPRAIL+DL+
Sbjct: 59 YVPRAILVDLD 69
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKV 816
P K V PYN P L++N +C DNE ++ I K+
Sbjct: 171 PSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G YG LF PD + G A N +A+G Y G R LQ F +
Sbjct: 81 IRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLV 140
Query: 567 THSLXG 584
HS G
Sbjct: 141 FHSFGG 146
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
VR+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 78 VRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLI 137
Query: 567 THSLXG 584
HS G
Sbjct: 138 FHSFGG 143
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
V + G G G WE GI P G+ + +E S + + G
Sbjct: 5 VSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPS----GK 60
Query: 335 XVPRAILLDLE 367
VPRAI +DLE
Sbjct: 61 HVPRAIFVDLE 71
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXI 795
P P+ V PYN + +E++ ++ DNE +Y I
Sbjct: 173 PAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEI 212
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+GAY LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 75 IRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFV 134
Query: 567 THSLXG 584
HS G
Sbjct: 135 FHSFGG 140
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ ++ DNE +Y I +V P
Sbjct: 170 PAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRP 219
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G S + E + ++ G
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG------SGR 58
Query: 335 XVPRAILLDLE 367
VPR+I +DLE
Sbjct: 59 YVPRSIFVDLE 69
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERP 220
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRP 220
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/71 (25%), Positives = 25/71 (35%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G E + ++ G
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG------NGR 58
Query: 335 XVPRAILLDLE 367
VPR+I +DLE
Sbjct: 59 YVPRSIFVDLE 69
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/71 (25%), Positives = 25/71 (35%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G E + ++ G
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG------NGR 58
Query: 335 XVPRAILLDLE 367
VPR+I +DLE
Sbjct: 59 YVPRSIFVDLE 69
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRP 220
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G S + E + ++ G
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG------SGR 58
Query: 335 XVPRAILLDLE 367
VPR+I +DLE
Sbjct: 59 YVPRSIFVDLE 69
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERP 220
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 78 IRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLV 137
Query: 567 THSLXG 584
HS G
Sbjct: 138 FHSFGG 143
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ ++ DNE +Y I + P
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERP 222
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 77 IRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLV 136
Query: 567 THSLXG 584
HS G
Sbjct: 137 FHSFGG 142
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ ++ DNE +Y I + P
Sbjct: 172 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERP 221
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 78 IRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLV 137
Query: 567 THSLXG 584
HS G
Sbjct: 138 FHSFGG 143
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ ++ DNE +Y I + P
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERP 222
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 78 IRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLV 137
Query: 567 THSLXG 584
HS G
Sbjct: 138 FHSFGG 143
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ ++ DNE +Y I + P
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERP 222
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRP 220
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 76 IRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFV 135
Query: 567 THSLXG 584
HS G
Sbjct: 136 FHSFGG 141
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXIXYXXXKVPXP 825
P P+ V PYN + +E++ + DNE +Y I V P
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRP 220
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
VR+G Y LF P+ + G A N +A+G Y G + LQ F +
Sbjct: 84 VRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVI 143
Query: 567 THSLXG 584
HS G
Sbjct: 144 FHSFGG 149
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G + E ++ A A GG
Sbjct: 11 ISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA----GGK 66
Query: 335 XVPRAILLDLE 367
VPR + +DLE
Sbjct: 67 HVPRCLFVDLE 77
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXI 795
P P+ V PYN + +E++ T+ DNE +Y I
Sbjct: 179 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 218
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
+R+G Y LF P+ + G A N +A+G Y G R LQ F +
Sbjct: 83 IRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLV 142
Query: 567 THSLXG 584
HS G
Sbjct: 143 FHSFGG 148
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +2
Query: 155 VXLXAGXCGXXXGAXFWEXXSXXXGIDPTGVYRGXSXLQLERXSVYYXXASVATAXXGGX 334
+ + G G G WE GI P G+ L ++ S + + G
Sbjct: 10 ISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDS----FNTFFSETMAGK 65
Query: 335 XVPRAILLDLE 367
VPRAI++DLE
Sbjct: 66 HVPRAIMVDLE 76
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXI 795
P P+ V PYN + +E++ ++ DNE +Y I
Sbjct: 178 PAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDI 217
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGXSGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXFXL 566
VR+G Y LF P+ + G A N +A+G Y G + LQ F +
Sbjct: 56 VRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVI 115
Query: 567 THSLXG 584
HS G
Sbjct: 116 FHSFGG 121
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 676 PRPKYQXPXVXPYNPFSXSPXLVENTXXTYCXDNEGLYXI 795
P P+ V PYN + +E++ T+ DNE +Y I
Sbjct: 151 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDI 190
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGX--SGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXF 560
++S + LF D GAGN WA G Y +G L
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 561 XLTHSLXGXXRFRXGXPSLISKIREEXPDRIM 656
THS+ G G L+ ++RE P +++
Sbjct: 138 LFTHSVSGGTGSGTG-SLLLERLREAFPKKVI 168
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Frame = +3
Query: 387 VRSGAYGXLFRPDXFVFGX--SGAGNXWAKGXYXEGXXXXXXXXXXXRXXCXXXXCLQXF 560
++S + LF D GAGN WA G Y +G L
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 561 XLTHSLXGXXRFRXGXPSLISKIREEXPDRIM 656
THS+ G G L+ ++RE P +++
Sbjct: 138 LFTHSVSGGTGSGTG-SLLLERLREAFPKKVI 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,679,541
Number of Sequences: 27780
Number of extensions: 69840
Number of successful extensions: 160
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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