Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_C01
(1060 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.010
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.017
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.090
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.36
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.36
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.010
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 173 SPXPXXXNXPPXPXXPPPXPPPXL---XPXPPXPPPP 274
+P P P PPP PPP + P PP PPPP
Sbjct: 747 APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 176 PXPXXXNXPPXPXX-PPPXPPPXLXPXPPXPPPPXXXG 286
P P P P P P P P + PP PPPP G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 174 PPXRXXKTXXXXPXXXPPPRPLSXXPXXPXXLPPP 278
PP T P PPP P+ P P PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPP 768
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 218 PPPXPPPXLXPXP---PXPPPP 274
PPP PP + P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP 753
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.017
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 209 PXXPPPXPPPXLXPXPPXPPPPXXXGXXXXNKLK 310
P PPP PPP P PPPP G K K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
Score = 34.7 bits (76), Expect = 0.022
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 200 PPXPXXPPPXPPPXLXPXPPXPPPPXXXGXXXXNK 304
PP PPP PP P P PPPP NK
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 172 LPPXGGXKXPXXPXXXXPXPAPXPXPPP 255
LPP G P P P P P PPP
Sbjct: 4 LPP-GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.090
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 155 PXLXXXSPXPXXXNXPPXPXXPPPXPPPXLXPXPPXP 265
P + +P P + PP P PP P P PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 200 PPXPXXPPPXPPPXLXPXPPXPPP 271
PP P P PPP P PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 200 PPXPXXPPPXPPPXLXPXPPXPPPP 274
PP PPP PP P PPPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.48
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 200 PPXPXXPPPXPPPXLXPXPPXPPPP 274
PP PPP P + PP PPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 155 PXLXXXSPXPXXXNXPPXPXXPPPXPPPXLXPXPPXPPP 271
P + S P + P P P PPP P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 174 PPXRXXKTXXXXPXXXPPPRPLSXXPXXPXXLPPP 278
PP T P PPP P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 153 PPXXLXXPPXRXXKTXXXXPXXXPPPRPLSXXPXXP 260
PP PP P PPP P S P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.36
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +2
Query: 176 PXPXXXNXPPXPXXPPPXP---PPXLXPXPPXPPPP 274
P P + PP P PP P PP P P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 29.5 bits (63), Expect = 0.83
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
Frame = +2
Query: 200 PPXPXXPPPXP---PPXLXPXPPXP---PPP 274
PP P PPP P PP PP P PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 221 PPXPPPXLXPXPPXPPPPXXXG 286
PP PPP P P PP G
Sbjct: 5 PPPPPPAPAPAAAAPAPPLMTG 26
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = +2
Query: 155 PXLXXXSPXPXXXNXPPXPXXPPPXPPPXLXPXPPXPPPP 274
P + P P P P P + P PP PPP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 270 GGGXGGXGXRXGGGXGGGXXGXGG 199
GG GG G GGG GG G GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGG 49
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 267 GGXGGXGXRXGGGXGGGXXGXGG 199
GG GG G GG GGG G G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARG 45
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 173 SPXPXXXNXPPXPXXPPPXPPPXLXPXPPXPPPP 274
SP P PP P P P PP PPPP
Sbjct: 166 SPPPSFQ--PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 209 PXXPPPXPPPXLXPXPPXPPPP 274
P PP P P P PPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP 242
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 203 PXPXXPPPXPPPXLXP 250
P P PPP PPP L P
Sbjct: 234 PLPAPPPP-PPPTLPP 248
Score = 21.4 bits (43), Expect(2) = 2.5
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 230 PPPXLXPXPPXPP 268
PPP PP PP
Sbjct: 274 PPPATPSQPPRPP 286
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 200 PPXPXXPPPXPPPXLXPXPPXPPPP 274
PP PP PPP P PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 176 PXPXXXNXPPXPXXPPPXPPPXLXPXPPXPPP 271
P P + P PPP PP PPP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +2
Query: 176 PXPXXXNXPPX--PXXPPPXPPPXLXPXPPXPPPP 274
P P + PP P PP PP P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +2
Query: 155 PXLXXXSPX--PXXXNXPPXPXXPP--PXPPPXLXPXPPXP 265
P L +P P P P PP P PPP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 176 PXPXXXNXP-PXPXXPPPXPPPXLXPXPPXPPP 271
P P P P P PP P P + PP PPP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVG-VPPVPPP 1213
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Frame = +2
Query: 176 PXPXXXNXPPXPXXP---PPXPPPXLXPXPPXP 265
P P PP P PP PPP P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 270 GGGXGGXGXRXGGGXGGGXXGXGG 199
GG GG G GG GGG G G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFG 171
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -2
Query: 273 GGGGXGGXGXRXGGGXGGGXXGXG-GXFXXXGXG 175
GG GG G GG GGG G G F G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 3.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 248 PXPPXPPPP 274
P PP PPPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 209 PXXPPPXPPP 238
P PPP PPP
Sbjct: 942 PAFPPPPPPP 951
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Frame = +2
Query: 155 PXLXXXSPXPXXXNXPPXPXXPPPXPP-PXLXPXPPXPPP 271
P L P PP P P P P P P P P P
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVP 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,677,434
Number of Sequences: 5004
Number of extensions: 21008
Number of successful extensions: 335
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 557214894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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