Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B14
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0498 + 3734498-3734976,3736176-3736800                           30   2.7  
11_01_0483 - 3718104-3718802,3718817-3719308                           29   4.8  
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297     29   6.3  
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305           29   6.3  
04_04_0534 + 26071227-26071811                                         29   6.3  
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    28   8.4  

>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 479 DVGSVSDYGVIGRVAQVIVDALPFLAVGGLARKV 378
           D    +D GV+  +A  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>11_01_0483 - 3718104-3718802,3718817-3719308
          Length = 396

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -1

Query: 630 PFRVPPAAALVHWXGSPAWA*WDLLAVSGREPDSRRRCTMNTGHCRL 490
           P  VPP AA     G P W      A + RE D     T N+G  ++
Sbjct: 15  PSGVPPPAAAAAARGYPGWVMLMPYATAEREVDDSEYSTSNSGGAKI 61


>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
          Length = 311

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 550 DRQQIPSRPGRRPXPMNQGCGW 615
           D +Q P R G  P P  Q CGW
Sbjct: 34  DDEQPPPRRGAAPPPQQQLCGW 55


>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
          Length = 611

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 234 NMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 359
           N++  D  +  + + TS++ P  L+P+  P+V   AP    P
Sbjct: 17  NVEASDDHAAFDAMATSSRRPPSLRPLRHPNVTSLAPVIFPP 58


>04_04_0534 + 26071227-26071811
          Length = 194

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 520 STSAVWLPTRDRQQIPSRPGRRPXPMNQGCGWRNP 624
           + +  W  T   +    R GRRP    + C WR P
Sbjct: 79  AATVAWRHTAGARLATRRRGRRPARRRRDCAWRRP 113


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 192 KLLLIGFLAAACAQNMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 359
           K+L   FL     Q   +       ++  ++  PPTQ  P    S A  AP+T VP
Sbjct: 63  KVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVP 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,078,129
Number of Sequences: 37544
Number of extensions: 475830
Number of successful extensions: 1542
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)