Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B14
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    30   2.4  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   4.3  
Z81470-1|CAB03881.1|  321|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical...    28   9.9  

>U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical
           protein F58F12.4 protein.
          Length = 150

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = +3

Query: 240 DTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGEC 419
           ++ DL + IN+   S    +Q++  TQ   +   PST +P     +DL C + +     C
Sbjct: 26  ESSDLANFINET-DSEMTSSQIESSTQIPSSTMNPSTKLPSSMRGKDLHCPSIENAVSSC 84

Query: 420 ------VNYYLCNAAN 449
                 V Y  C  AN
Sbjct: 85  PKDSKWVYYTCCGGAN 100


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 493 SAVARVHRTSTSAVWLPTRDRQQIPSRPGRRPXPMNQ 603
           SA + V R  T A  + +  R + PSRPG RP   N+
Sbjct: 389 SASSSVPRVPTGAASMTSSSRIRPPSRPGSRPGSRNE 425


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 435 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 554
           C +  ++I + G    ++ +  GPCS++ID C   PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137


>Z81470-1|CAB03881.1|  321|Caenorhabditis elegans Hypothetical
           protein C14A6.1 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 195 LLLIGFLAAACAQNMDTGDL-ESIINQIFTSAKPPTQ 302
           LLL G L AA AQN +TG +  S  N+ +     P Q
Sbjct: 6   LLLFGLLGAATAQNCNTGGIYNSQFNRCYQYFTAPAQ 42


>AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical
           protein Y54G2A.13 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +3

Query: 279 TSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQ--TSDGQEGE 416
           T+  P T L+P T P   D       P  ST   ++ Q  T+  Q+ E
Sbjct: 221 TTTTPTTTLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKNE 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,106
Number of Sequences: 27780
Number of extensions: 336266
Number of successful extensions: 1125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)