Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B14
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   2.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   2.1  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   2.7  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    23   2.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   3.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   3.6  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   8.4  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 546 QRPPTDPITPRPETLXNEPGLRLAEP*TALPSGP 647
           ++ P+ P+ PRP +    P   +  P   LPS P
Sbjct: 646 RKMPSMPLLPRPISCHTTPDSFIEAPNKTLPSLP 679


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 598 NQGCGWRNPER 630
           N  CGW+NP R
Sbjct: 150 NCNCGWKNPSR 160


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 571 RPGRRPXPMNQGCGWRNPE 627
           +PGRRP P   G G  NP+
Sbjct: 28  QPGRRPFPTFPGQGPFNPK 46


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 571 RPGRRPXPMNQGCGWRNPE 627
           +PGRRP P   G G  NP+
Sbjct: 14  QPGRRPFPTFPGQGPFNPK 32


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 543 REPDSRRRCTMNTGHC 496
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 543 REPDSRRRCTMNTGHC 496
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 326 CR*QGSIDPGAWRLYERGPFVP 391
           CR  G++   A  LYE   FVP
Sbjct: 123 CRNIGAVPKMATELYEESLFVP 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,451
Number of Sequences: 438
Number of extensions: 3993
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)