Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B11
         (1096 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    30   3.3  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   7.7  

>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = +2

Query: 539 PNPTLPXPGXXHPTSPXPSHXXPNLXTPTPXCSWXQXYXPXTR*KMXXXXXPXRSPP 709
           P+P+ P P    P+ P PS+  P+  +P+          P  + +         SPP
Sbjct: 363 PSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGYDAPSPP 419


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +2

Query: 539  PNPTLPXPGXXHPTSPXPSHXXPNLXTPT-PXCSWXQXYXP 658
            P+P+ P P    P  P P+   PN  +P  P  +W     P
Sbjct: 1002 PSPSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNGP 1042


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,201,000
Number of Sequences: 27780
Number of extensions: 138924
Number of successful extensions: 280
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2950351116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)