Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B08
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   112   4e-25
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   107   1e-23
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   106   3e-23
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   102   3e-22
11_06_0289 - 21969248-21973516                                         35   0.098
11_06_0185 + 21018045-21022307                                         35   0.098
11_06_0284 + 21909758-21913645                                         29   4.9  
02_01_0107 + 785993-786359,786773-787703,787807-787975,788472-78...    29   4.9  

>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  112 bits (269), Expect = 4e-25
 Identities = 50/76 (65%), Positives = 60/76 (78%)
 Frame = +1

Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
           FIM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+DL+ +PFFP LV+Y
Sbjct: 5   FIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEY 64

Query: 340 MSSGPVVPMVWEGLNV 387
           + SGPVV MVWEG +V
Sbjct: 65  IISGPVVAMVWEGKDV 80



 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
           +W G+ +  V TGR+++GAT P ++ PGTIR D  ++VGRN+IHGSDSV++ KK+I LWF
Sbjct: 74  VWEGKDV--VATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWF 131

Query: 542 TDXEXVGWTPANENWVY 592
            +     W      W+Y
Sbjct: 132 PEG-LAEWRSNLHPWIY 147


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  107 bits (257), Expect = 1e-23
 Identities = 48/76 (63%), Positives = 58/76 (76%)
 Frame = +1

Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
           +IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY DL  +PFFP L++Y
Sbjct: 6   YIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGLIEY 65

Query: 340 MSSGPVVPMVWEGLNV 387
           ++SGPVV M WEG  V
Sbjct: 66  ITSGPVVCMAWEGNGV 81



 Score = 84.6 bits (200), Expect = 9e-17
 Identities = 34/75 (45%), Positives = 50/75 (66%)
 Frame = +2

Query: 365 WYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFT 544
           W G  +  V + R+++GATNP  ++PGTIRGDL +Q GRN++HGSDS ++ K++I LWF 
Sbjct: 76  WEGNGV--VASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALWFK 133

Query: 545 DXEXVGWTPANENWV 589
           + E   W      W+
Sbjct: 134 EGELCEWESVLTPWL 148


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  106 bits (254), Expect = 3e-23
 Identities = 47/76 (61%), Positives = 57/76 (75%)
 Frame = +1

Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
           FI +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY DL  RPFF  L  +
Sbjct: 49  FIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNGLCDF 108

Query: 340 MSSGPVVPMVWEGLNV 387
           +SSGPV+ MVWEG  V
Sbjct: 109 LSSGPVLAMVWEGEGV 124



 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = +2

Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
           +W G  +  +K GR+++GAT+P  S+PGTIRGDL + VGRNIIHGSD  E+AK +IGLWF
Sbjct: 118 VWEGEGV--IKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKAEIGLWF 175

Query: 542 TDXEXVGWTPANENWVY 592
              E V +T   E W+Y
Sbjct: 176 EPRELVSYTSNEEKWIY 192


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  102 bits (245), Expect = 3e-22
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = +1

Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
           FIM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+DL+S+PFF  LV+Y
Sbjct: 7   FIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGLVEY 66

Query: 340 MSSGPVVPMVWEGLNV 387
           + SGPVV MVWEG  V
Sbjct: 67  IVSGPVVAMVWEGKQV 82



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = +2

Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
           +W G+ +  V TGR+++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE+A+K+I LWF
Sbjct: 76  VWEGKQV--VSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVENARKEIALWF 133

Query: 542 TDXEXVGWTPANENWVY 592
            +     W      W+Y
Sbjct: 134 PEG-IAEWRSNQHPWIY 149


>11_06_0289 - 21969248-21973516
          Length = 1422

 Score = 34.7 bits (76), Expect = 0.098
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 226  KKGFKLVGLK-FVWPSEELLQQHYSDLASRPFFPXLVKYMSSGPVVPMVWEGLNVCEDWP 402
            KK F  +  K F++   +L +++ S L     FP   K   S  +   V EGL   EDWP
Sbjct: 808  KKSFDTIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIARWVAEGLTFKEDWP 867

Query: 403  SNAWR 417
            S+ ++
Sbjct: 868  SSVYQ 872


>11_06_0185 + 21018045-21022307
          Length = 1420

 Score = 34.7 bits (76), Expect = 0.098
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 226  KKGFKLVGLK-FVWPSEELLQQHYSDLASRPFFPXLVKYMSSGPVVPMVWEGLNVCEDWP 402
            KK F  +  K F++   +L +++ S L     FP   K   S  +   V EGL   EDWP
Sbjct: 806  KKSFDTIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIARWVAEGLTFKEDWP 865

Query: 403  SNAWR 417
            S+ ++
Sbjct: 866  SSVYQ 870


>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 256 FVWPSEELLQQHYSDLASRPFFPXLVKYMSSGPVVPMVWEGLNVCEDWPSN 408
           F++   +L +++ S L     FP   K   S  V   V EGL   EDWPS+
Sbjct: 812 FMYSYNDLPKEYKSCLLYLAIFPKGEKIRRSTLVGRWVAEGLTFREDWPSS 862


>02_01_0107 +
           785993-786359,786773-787703,787807-787975,788472-788588,
           788815-788961
          Length = 576

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 494 GSDSVESAKKDIGL-WFTDXEXVGWTPA 574
           G +  + AKKD+G+ W  D    GW PA
Sbjct: 234 GDEEHQPAKKDVGIAWEDDENNEGWLPA 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,853,899
Number of Sequences: 37544
Number of extensions: 294744
Number of successful extensions: 614
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)