BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_B08
(874 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4796|AAF57188.3| 172|Drosophila melanogaster CG2210-PA... 141 1e-33
BT001459-1|AAN71214.1| 118|Drosophila melanogaster GM19775p pro... 140 2e-33
X13107-1|CAA31500.1| 153|Drosophila melanogaster protein ( Dros... 140 3e-33
AY113576-1|AAM29581.1| 153|Drosophila melanogaster RH27794p pro... 140 3e-33
BT024430-1|ABC86492.1| 153|Drosophila melanogaster IP02578p pro... 34 0.22
BT029417-1|ABK57074.1| 151|Drosophila melanogaster IP02577p pro... 34 0.29
AF241152-1|AAF64469.1| 151|Drosophila melanogaster type 6 nucle... 34 0.29
AF241151-1|AAF64467.1| 151|Drosophila melanogaster type 6 nucle... 34 0.29
AE014298-2041|AAF48378.2| 151|Drosophila melanogaster CG5310-PA... 34 0.29
X85331-1|CAA59680.1| 437|Drosophila melanogaster msh protein. 33 0.51
AY069763-1|AAL39908.1| 387|Drosophila melanogaster RE01365p pro... 31 1.6
AF202050-1|AAF20908.1| 244|Drosophila melanogaster nmdyn-D7 pro... 31 1.6
AE014297-999|AAF54425.1| 387|Drosophila melanogaster CG8362-PA ... 31 1.6
>AE014297-4796|AAF57188.3| 172|Drosophila melanogaster CG2210-PA
protein.
Length = 172
Score = 141 bits (342), Expect = 1e-33
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +1
Query: 118 SXLSCVSRNNVXVLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYS 297
S +S N FIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+
Sbjct: 14 SVISATMAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYA 73
Query: 298 DLASRPFFPXLVKYMSSGPVVPMVWEGLNV 387
DL++RPFFP LV YM+SGPVVPMVWEGLNV
Sbjct: 74 DLSARPFFPGLVNYMNSGPVVPMVWEGLNV 103
Score = 122 bits (294), Expect = 6e-28
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +2
Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
+W G L VKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHGSD+VESA+K+I LWF
Sbjct: 97 VWEG--LNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWF 154
Query: 542 TDXEXVGWTPANENWVY 592
+ E V WTPA ++W+Y
Sbjct: 155 NEKELVTWTPAAKDWIY 171
>BT001459-1|AAN71214.1| 118|Drosophila melanogaster GM19775p
protein.
Length = 118
Score = 140 bits (339), Expect = 2e-33
Identities = 62/78 (79%), Positives = 71/78 (91%)
Frame = +1
Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
FIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFP LV Y
Sbjct: 8 FIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNY 67
Query: 340 MSSGPVVPMVWEGLNVCE 393
M+SGPVVPMVWEGLNV +
Sbjct: 68 MNSGPVVPMVWEGLNVVQ 85
>X13107-1|CAA31500.1| 153|Drosophila melanogaster protein (
Drosophila melanogasterawd mRNA ( abnormal wing disc ).
).
Length = 153
Score = 140 bits (338), Expect = 3e-33
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +1
Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
FIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFP LV Y
Sbjct: 9 FIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNY 68
Query: 340 MSSGPVVPMVWEGLNV 387
M+SGPVVPMVWEGLNV
Sbjct: 69 MNSGPVVPMVWEGLNV 84
Score = 122 bits (294), Expect = 6e-28
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +2
Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
+W G L VKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHGSD+VESA+K+I LWF
Sbjct: 78 VWEG--LNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWF 135
Query: 542 TDXEXVGWTPANENWVY 592
+ E V WTPA ++W+Y
Sbjct: 136 NEKELVTWTPAAKDWIY 152
>AY113576-1|AAM29581.1| 153|Drosophila melanogaster RH27794p
protein.
Length = 153
Score = 140 bits (338), Expect = 3e-33
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +1
Query: 160 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLVKY 339
FIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFP LV Y
Sbjct: 9 FIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNY 68
Query: 340 MSSGPVVPMVWEGLNV 387
M+SGPVVPMVWEGLNV
Sbjct: 69 MNSGPVVPMVWEGLNV 84
Score = 122 bits (294), Expect = 6e-28
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +2
Query: 362 LWYGRALMXVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWF 541
+W G L VKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHGSD+VESA+K+I LWF
Sbjct: 78 VWEG--LNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWF 135
Query: 542 TDXEXVGWTPANENWVY 592
+ E V WTPA ++W+Y
Sbjct: 136 NEKELVTWTPAAKDWIY 152
>BT024430-1|ABC86492.1| 153|Drosophila melanogaster IP02578p
protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.22
Identities = 17/87 (19%), Positives = 41/87 (47%)
Frame = +1
Query: 145 NVXVLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFP 324
++ + ++KP ++ I + F ++ K V ++EL ++ Y++ + F+
Sbjct: 2 DMEITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYH 61
Query: 325 XLVKYMSSGPVVPMVWEGLNVCEDWPS 405
L +M+SGP ++ + + W S
Sbjct: 62 RLTSFMNSGPSYALILQSETCIQKWRS 88
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 389 VKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFTDXE 553
++ R +LG T S P IR I RN HGSDS SA ++I + F + +
Sbjct: 83 IQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFD 140
>BT029417-1|ABK57074.1| 151|Drosophila melanogaster IP02577p
protein.
Length = 151
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +1
Query: 154 VLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLV 333
+ ++KP ++ I + F ++ K V ++EL ++ Y++ + F+ L
Sbjct: 3 ITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRLT 62
Query: 334 KYMSSGPVVPMVWEGLNVCEDWPS 405
+M+SGP ++ + + W S
Sbjct: 63 SFMNSGPSYALILQSETCIQKWRS 86
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 389 VKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFTDXE 553
++ R +LG T S P IR I RN HGSDS SA ++I + F + +
Sbjct: 81 IQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFD 138
>AF241152-1|AAF64469.1| 151|Drosophila melanogaster type 6
nucleoside diphosphatekinase protein.
Length = 151
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +1
Query: 154 VLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLV 333
+ ++KP ++ I + F ++ K V ++EL ++ Y++ + F+ L
Sbjct: 3 ITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRLT 62
Query: 334 KYMSSGPVVPMVWEGLNVCEDWPS 405
+M+SGP ++ + + W S
Sbjct: 63 SFMNSGPSYALILQSETCIQKWRS 86
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 389 VKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFTDXE 553
++ R +LG T S P IR I RN HGSDS SA ++I + F + +
Sbjct: 81 IQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFD 138
>AF241151-1|AAF64467.1| 151|Drosophila melanogaster type 6
nucleoside diphosphatekinase protein.
Length = 151
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +1
Query: 154 VLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLV 333
+ ++KP ++ I + F ++ K V ++EL ++ Y++ + F+ L
Sbjct: 3 ITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRLT 62
Query: 334 KYMSSGPVVPMVWEGLNVCEDWPS 405
+M+SGP ++ + + W S
Sbjct: 63 SFMNSGPSYALILQSETCIQKWRS 86
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 389 VKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFTDXE 553
++ R +LG T S P IR I RN HGSDS SA ++I + F + +
Sbjct: 81 IQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFD 138
>AE014298-2041|AAF48378.2| 151|Drosophila melanogaster CG5310-PA
protein.
Length = 151
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +1
Query: 154 VLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPXLV 333
+ ++KP ++ I + F ++ K V ++EL ++ Y++ + F+ L
Sbjct: 3 ITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRLT 62
Query: 334 KYMSSGPVVPMVWEGLNVCEDWPS 405
+M+SGP ++ + + W S
Sbjct: 63 SFMNSGPSYALILQSETCIQKWRS 86
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 389 VKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSDSVESAKKDIGLWFTDXE 553
++ R +LG T S P IR I RN HGSDS SA ++I + F + +
Sbjct: 81 IQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFD 138
>X85331-1|CAA59680.1| 437|Drosophila melanogaster msh protein.
Length = 437
Score = 33.1 bits (72), Expect = 0.51
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 284 WRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 177
WRS+S H K TS FS S++ TRPR P+
Sbjct: 41 WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76
>AY069763-1|AAL39908.1| 387|Drosophila melanogaster RE01365p
protein.
Length = 387
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 130 CVSRNNVXVLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 309
CV +N + +KP ++ GL+G II GF+L ++ + + ++ Y
Sbjct: 242 CVFKNTTLAI---IKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRG 298
Query: 310 -RPFFPXLVKYMSSG 351
P + +V ++SG
Sbjct: 299 VVPEYIPMVAQLASG 313
>AF202050-1|AAF20908.1| 244|Drosophila melanogaster nmdyn-D7
protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 130 CVSRNNVXVLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 309
CV +N + +KP ++ GL+G II GF+L ++ + + ++ Y
Sbjct: 99 CVFKNTTLAI---IKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRG 155
Query: 310 -RPFFPXLVKYMSSG 351
P + +V ++SG
Sbjct: 156 VVPEYIPMVAQLASG 170
>AE014297-999|AAF54425.1| 387|Drosophila melanogaster CG8362-PA
protein.
Length = 387
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 130 CVSRNNVXVLFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 309
CV +N + +KP ++ GL+G II GF+L ++ + + ++ Y
Sbjct: 242 CVFKNTTLAI---IKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRG 298
Query: 310 -RPFFPXLVKYMSSG 351
P + +V ++SG
Sbjct: 299 VVPEYIPMVAQLASG 313
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,218,785
Number of Sequences: 53049
Number of extensions: 490859
Number of successful extensions: 825
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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