Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_B07
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.099
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.53
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 0.79
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.92
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 765 PPPPXXXXPXPXXXPXXXXPXXXXPXXXPXPPXXXPPXPPXXXXXXPPPP 914
PPPP P P P PP PP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPP 778
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 766 PPPPPXXRPXPXXXPXXXXXXXXXPXXXXXPXXXXPRPXXXXSXPPPPP 912
PPPPP P P P P P P + PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-PGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 424 PPPPPPXXXXXXPPXPXXXXXXXXXXXXXXXXXXXXXXXXSXXTXXPPPPPPXPPA 591
PPPPPP P P PPPPPP PPA
Sbjct: 732 PPPPPPAVIV---PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +1
Query: 346 PPPPXXXXXKXXXXXXXXXPPXXXX---XPPPPPPXXXXXXPPXP 471
PPPP PP PPPPPP PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 565 PPPPPXPPAXXXXXPXXXXXXPP 633
PPPPP PP P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.53
Identities = 31/154 (20%), Positives = 33/154 (21%), Gaps = 5/154 (3%)
Frame = +1
Query: 346 PPPPXXXXXKXXXXXXXXXPPXXXXXPPPPPPXXXXXXPPXPXXXXXXXXXXXXXXXXXX 525
PP P PP PP P PP P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 526 XXXXXXSXXTXXPPPPPPXP-PAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXXXXX 702
+ P PP P P+ PP P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 703 GXXG----PPXXXXXXXXXPXXXXPPPPPPXXRP 792
G PP P PP PPP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 28.7 bits (61), Expect = 1.2
Identities = 31/162 (19%), Positives = 33/162 (20%), Gaps = 5/162 (3%)
Frame = +1
Query: 340 GXPPPPXXXXXKXXXXXXXXXPPXXXXXPPPPPPXXXXXXPPXPXXXXXXXXXXXXXXXX 519
G PP P PP PP PP P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 520 XXXXXXXXSXXTXXPP--PPPPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXX 693
+ P PP P P P PP P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 694 XXXGXXGPPXXXXXXXXX---PXXXXPPPPPPXXRPXPXXXP 810
PP P PP P P + P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 4.9
Identities = 27/114 (23%), Positives = 28/114 (24%)
Frame = +1
Query: 568 PPPPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXXXXXGXXGPPXXXXXXXXX 747
PP P P P PP P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAP-SGAPPVPKPSVAAPPVPVPSGAPP------VPK 1144
Query: 748 PXXXXPPPPPPXXRPXPXXXPXXXXXXXXXPXXXXXPXXXXPRPXXXXSXPPPP 909
P PP P P P P P P P P+P PPP
Sbjct: 1145 PSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPP 1194
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 0.79
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 544 SXXTXXPPPPPPXP 585
S + PPPPPP P
Sbjct: 364 SNISYSPPPPPPPP 377
Score = 23.8 bits (49), Expect(2) = 0.79
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 565 PPPPPXPPAXXXXXP 609
PPPPP PP P
Sbjct: 370 PPPPPPPPELLNHSP 384
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 768 PPPXXXXPXPXXXPXXXXPXXXXPXXXPXPPXXXPPXPPXXXXXXPPPP 914
PPP P P P P P PP P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.2
Identities = 38/190 (20%), Positives = 40/190 (21%), Gaps = 2/190 (1%)
Frame = +1
Query: 349 PPPXXXXXKXXXXXXXXXPPXXXXXPPPPPPXXXXXXPPXPXXXXXXXXXXXXXXXXXXX 528
PPP PP PPPPP PP
Sbjct: 293 PPPSSRVSAAALAANKKRPP-----PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 529 XXXXXSXXTXXPPPPPPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXXXXXGX 708
PPPP P + P PP P
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRS----APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL 403
Query: 709 XGPPXXXXXXXXXPXXXXPPPPPPXXRP--XPXXXPXXXXXXXXXPXXXXXPXXXXPRPX 882
PP P PP PP P P P P P P
Sbjct: 404 --PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Query: 883 XXXSXPPPPP 912
+ PP PP
Sbjct: 462 GMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/90 (23%), Positives = 21/90 (23%), Gaps = 4/90 (4%)
Frame = +1
Query: 553 TXXPPPPPPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXXXXXGXXGPPXXXX 732
T PP PPP PP P P PP
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Query: 733 XXXXXPXXXX----PPPPPPXXRPXPXXXP 810
P PPPPPP P P
Sbjct: 347 AAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 27.1 bits (57), Expect = 3.7
Identities = 32/157 (20%), Positives = 35/157 (22%), Gaps = 6/157 (3%)
Frame = +1
Query: 346 PPPPXXXXXKXXXXXXXXXPPXXXXXPPPPPP---XXXXXXPP---XPXXXXXXXXXXXX 507
PPPP + PP PPPPPP PP
Sbjct: 337 PPPPPPP--RSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
Query: 508 XXXXXXXXXXXXSXXTXXPPPPPPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXX 687
+ PP P PP+ P P P P
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP---- 450
Query: 688 XXXXXGXXGPPXXXXXXXXXPXXXXPPPPPPXXRPXP 798
PP P P PPP P P
Sbjct: 451 ---PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 771 PPXXXXPXPXXXPXXXXPXXXXPXXXPXPPXXXPPXPPXXXXXXPPPP 914
PP P P P P P PP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 428 PXPPPPXXXXPPPP 469
P PPPP PPPP
Sbjct: 1705 PTPPPPPMSVPPPP 1718
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +3
Query: 765 PPPPXXXXPXPXXXPXXXXPXXXXPXXXPXPPXXXPPXP 881
PPPP P P P P P P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 544 SXXTXXPPPPPPXPPAXXXXXPXXXXXXPPXPXP 645
S T PPP PP P PP P P
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/52 (28%), Positives = 15/52 (28%), Gaps = 5/52 (9%)
Frame = +3
Query: 774 PXXXXPXPXXXPXXXXPXXXXPXXXPXPPXXXPPXP-----PXXXXXXPPPP 914
P P P P P PP PP P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 554 PXXPPPPPPXPP 589
P PPPPPP PP
Sbjct: 942 PAFPPPPPPPPP 953
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 562 PPPPPPXPPA 591
PPPPPP PPA
Sbjct: 189 PPPPPPPPPA 198
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 5/82 (6%)
Frame = +1
Query: 562 PPPP--PPXPPAXXXXXPXXXXXXPPXPXPXXXXXXXXXPXXXXXXXXXGXX-GP--PXX 726
PPP PP A P PP P P G P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 727 XXXXXXXPXXXXPPPPPPXXRP 792
P PPPPPP P
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPP 248
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -2
Query: 532 PP--PPPPXPXGGXKKKKKK 479
PP PPPP P G KK+K K
Sbjct: 20 PPSQPPPPPPPGYVKKRKNK 39
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 403 PPXXXXXPPPPPPXXXXXXPPXP 471
PP PPPPP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1
Query: 562 PPPPPPXPPA 591
PPPPPP PP+
Sbjct: 306 PPPPPPPPPS 315
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,685,645
Number of Sequences: 5004
Number of extensions: 27260
Number of successful extensions: 508
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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