Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B05
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    29   3.5  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 225 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 401
           I+ PT      ++    NIE S D  +N+D+ K +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 402 EAVKVFRV 425
             VKV RV
Sbjct: 332 SRVKVMRV 339


>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
 Frame = +3

Query: 228 LQPTMFEDIKEIAKEYN--IEKSCDKYMNVDVVKQ-FMEMYKMGMLPRGETFVHTNELQM 398
           L+P +  D  E+ K+++  ++ S +   N++ VK  + E+++    P+ ET VH ++L M
Sbjct: 268 LKPLVLLD--ELTKKHSQLVDLSTEFLPNINAVKMLYKELFES--FPQLETNVHESKLSM 323

Query: 399 EEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAA------CFHRTDCKGLYL 560
           E  V+       +++ D F R    ++E++     +   T        C H   C G Y 
Sbjct: 324 ERRVEEVEEQLRSRNRD-FQR----LQEKLVAECCICLATKPSIVFMPCRHLITCSGCYD 378

Query: 561 PALTRSIPTSSLTAMSSV 614
            +  R  PT   T  +S+
Sbjct: 379 ASDFRECPTCRSTIENSI 396


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 467 RSPHENIEVLSVVEDSEDFD 408
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,889,445
Number of Sequences: 27780
Number of extensions: 304192
Number of successful extensions: 675
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)