Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_B03
         (1047 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    31   0.36 
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    28   1.9  
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|...    27   5.8  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    27   5.8  
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    26   7.7  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    26   7.7  

>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 30.7 bits (66), Expect = 0.36
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 307 NFXRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 191
           NF    ++P  STR+R  + +R   G +H+IC   D  +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794


>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +2

Query: 167 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 271
           DYN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1372

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 1002 PPPXPXSPPXPPPP 1043
            PPP P  PP PP P
Sbjct: 806  PPPAPLPPPAPPLP 819


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 193  RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 300
            R + ++C  R P  RP  +     PW + +  K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 147 TSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 269
           T+ + P  +T  ET ++ S+    T T+  +  TSS P+SL
Sbjct: 243 TNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 125 NLLTTARYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRP 244
           N L T+       K Y  +G G +P + G YY + P+G+P
Sbjct: 466 NPLETSLPYAPDMKIYCVHGVG-KPTERGYYYTNNPEGQP 504


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,787,935
Number of Sequences: 5004
Number of extensions: 31128
Number of successful extensions: 184
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 549226150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)