Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_B01
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 130 3e-30
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 130 3e-30
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 130 3e-30
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 123 3e-28
BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p pro... 29 7.8
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 7.8
AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p pro... 29 7.8
AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB... 29 7.8
AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA... 29 7.8
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 130 bits (313), Expect = 3e-30
Identities = 68/112 (60%), Positives = 74/112 (66%)
Frame = +3
Query: 99 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 434
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 130 bits (313), Expect = 3e-30
Identities = 68/112 (60%), Positives = 74/112 (66%)
Frame = +3
Query: 99 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 434
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 130 bits (313), Expect = 3e-30
Identities = 68/112 (60%), Positives = 74/112 (66%)
Frame = +3
Query: 99 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 279 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 434
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 123 bits (297), Expect = 3e-28
Identities = 66/112 (58%), Positives = 72/112 (64%)
Frame = +3
Query: 99 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 278
M +KAELA VY++LILVD VAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 279 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 434
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 65 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 214
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 280 VIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 179
+I S+ L+P+K N P QY T+ A K +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
>AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 65 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 214
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB,
isoform B protein.
Length = 969
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 65 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 214
RP C + VK + CL C H G W E + + GC+C
Sbjct: 909 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 957
>AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA,
isoform A protein.
Length = 989
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 65 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 214
RP C + VK + CL C H G W E + + GC+C
Sbjct: 929 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 977
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,359,366
Number of Sequences: 53049
Number of extensions: 380957
Number of successful extensions: 788
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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