Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_A02
(862 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 217 1e-57
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 122 5e-29
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 118 1e-27
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 97 2e-21
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 59 9e-10
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 59 9e-10
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 56 9e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 51 2e-07
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.21
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.64
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 1.5
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 4.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.5
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.0
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.0
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 6.0
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 6.0
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 26 7.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 217 bits (531), Expect = 1e-57
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +2
Query: 137 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 316
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 317 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 439
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 180 bits (438), Expect = 2e-46
Identities = 85/96 (88%), Positives = 89/96 (92%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 605
P P LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 606 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 713
GV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM IL
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 193
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 721 RGYSFTTTXXREIVRDIXXXLCYXXL 798
RGY+F+TT REIVRDI LCY L
Sbjct: 196 RGYTFSTTAEREIVRDIKEKLCYVAL 221
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 122 bits (295), Expect = 5e-29
Identities = 57/96 (59%), Positives = 71/96 (73%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 605
PR LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGD
Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGD 157
Query: 606 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 713
GV+H VP+YE L H + RLD+AGRD T YL+ +L
Sbjct: 158 GVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLL 193
Score = 95.5 bits (227), Expect = 9e-21
Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Frame = +2
Query: 143 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 316
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 317 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 427
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP 98
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 721 RGYSFTTTXXREIVRDIXXXLCY 789
+GY+F T E VR++ LCY
Sbjct: 196 KGYAFNRTADFETVREMKEKLCY 218
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 118 bits (283), Expect = 1e-27
Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +2
Query: 155 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 334
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 335 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHP 439
+ PIE GI+ NW DME+IW + + + +L PEEHP
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHP 107
Score = 111 bits (268), Expect = 9e-26
Identities = 49/92 (53%), Positives = 69/92 (75%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 605
P P LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GD
Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGD 162
Query: 606 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 701
G++H+VPIY+G+++P AI + ++ GRD+TDYL
Sbjct: 163 GLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYL 194
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 97.5 bits (232), Expect = 2e-21
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------T 581
P + LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + T
Sbjct: 121 PEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 180
Query: 582 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 713
G V+DSGDGV+H +P+ EGY + +I + LAGRD+T ++ +L
Sbjct: 181 GTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLL 224
Score = 68.5 bits (160), Expect = 1e-12
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 24/118 (20%)
Frame = +2
Query: 155 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 283
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 284 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 436
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDH 124
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 58.8 bits (136), Expect = 9e-10
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +3
Query: 438 PXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGV 611
P +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+
Sbjct: 117 PICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAA 176
Query: 612 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMXI 710
SH +P+ G + R+ G + YL+ +
Sbjct: 177 SHVIPVLNGERILSEAKRISWGGSQSSSYLLKL 209
Score = 57.6 bits (133), Expect = 2e-09
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 155 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 334
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 335 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 439
+ P E +++NWD ME++ +TF +L + EHP
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHP 117
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 58.8 bits (136), Expect = 9e-10
Identities = 33/96 (34%), Positives = 46/96 (47%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 605
P P L+TE NP NR K + MFE+ PA Y+A Q + +ASG+ T ++D G
Sbjct: 96 PLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGA 155
Query: 606 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 713
S IY+G+ L +G + D L L
Sbjct: 156 ERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTL 191
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/100 (33%), Positives = 52/100 (52%)
Frame = +2
Query: 140 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 319
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 320 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 439
G + +K I +G V NWD +W + +L+ P EHP
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHP 100
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 55.6 bits (128), Expect = 9e-09
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +3
Query: 426 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 605
P ++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G
Sbjct: 99 PTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGS 158
Query: 606 GVSHTVPIYEGYALPHAILRLDLAG 680
+ P+ +G + I + LAG
Sbjct: 159 DNASVTPVVDGLIIRKGIFKQSLAG 183
Score = 52.4 bits (120), Expect = 8e-08
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +2
Query: 140 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 319
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 320 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPXPAH*GSPQPQGQQRE 487
I + +K +GI+ +W+ W +L+V P E+ S PQ +++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQ 119
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 51.2 bits (117), Expect = 2e-07
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +3
Query: 477 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 656
+RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 657 ILRLDLAGRDLTDYLMXIL 713
+L L GR +T +L +L
Sbjct: 221 TQQLPLGGRYMTQHLQNLL 239
Score = 25.8 bits (54), Expect = 7.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 341 PIEHGIVTNWDDMEKIWHHTF 403
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 585 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXILT 716
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL +++
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVIS 202
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 155 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 334
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 335 KYPIEH--GIVTNWDDMEKIW 391
++ H G + +W +W
Sbjct: 58 QFRRAHEKGYLVHWSTETAVW 78
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 526 PCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 660
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 523 PPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 660
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 523 PPCTSPSKPCSHCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 660
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 523 PPCTSPSKPCSHCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 660
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 200 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 343
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.64
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 297 PTYESFCPM-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 136
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.1 bits (62), Expect = 0.85
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 502 CSKHSTRPPCTSPSKPCSHCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 660
C+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 502 CSKHSTRPPCTSPSKPCSHCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 660
C+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 547 PCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 651
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 505 SKHSTRPPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 651
S+H + +PS +H P+ P ++ W P T PT P + + + P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 366 TGMTWRRFGIIPSTMSCVSPPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 545
T +TW+ G P +S + N P L + L K T E P + AI+
Sbjct: 413 TNVTWKDAGYNPELLSINTITDNKPVLHVQEDLCKWWKESKGT--TSEATVAPTIQEAIE 470
Query: 546 AVLSLYASGRTT 581
V+S+ R T
Sbjct: 471 TVMSIKQKSRNT 482
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 523 PPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPS 630
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 444 LLTEAPLNPKANREKMTQIMFETFN 518
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 337 FEGQDTSFALCFVSYVRVLLSHADHHA 257
+EG+DT+ F +Y+R++L D A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 300 SPTYESFC--PMPTITP*WRGLPTIEGNTARGASSPAKPAL 184
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 529 CTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVA 684
C +PS+ C + PV + T S TP P+T + +PTP+ T A
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTSTTTTA 873
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 458 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALTVRVRSYHRYRAGLRRR 607
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 194 NRPCTYRSHCLLPTRQLP 141
NRP YRSH + TR+ P
Sbjct: 323 NRPSNYRSHSSMGTRRSP 340
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,207,481
Number of Sequences: 5004
Number of extensions: 71164
Number of successful extensions: 282
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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