Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_P21
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    64   2e-10
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    64   2e-10
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    41   0.002

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 43/140 (30%), Positives = 54/140 (38%)
 Frame = +1

Query: 145 KSXXKPXXXXLGXGVXRFSKSXXFXKXAKXXFXGKKXPKPEXPXKLTVVVKXXGGXXXGG 324
           K    P    L  G+ R+SK+  + + A      KK P  E        VK  GG   GG
Sbjct: 16  KGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGG 75

Query: 325 XXTVPLKRRXSFYPTQEXIRASSGGRPFSKXVRXXRXXLKIGXVCXLLAGXXAXXXXXXX 504
             TV LK+  + YPT+  ++       FS+  R  R  L  G V  LLAG          
Sbjct: 76  ERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLL 135

Query: 505 XXXXXXXXXXXXPFAFNSCP 564
                       PFA NSCP
Sbjct: 136 KVLASGLLLVTGPFALNSCP 155



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = +3

Query: 543 FCFQFVPXSRIPQXYVIGXSTRXSFGXXKXXKXFNDDYXXXXKXCVXRTVKXKEGXEIFX 722
           F     P  R+ Q YVIG S++   G  K  +  ND Y    K    +  K  E  +IF 
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLK--AKKDKKTGEA-DIFA 205

Query: 723 XKKEXYVPSXXXK 761
            KKE +VP+   K
Sbjct: 206 AKKERFVPNEQRK 218


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 43/140 (30%), Positives = 54/140 (38%)
 Frame = +1

Query: 145 KSXXKPXXXXLGXGVXRFSKSXXFXKXAKXXFXGKKXPKPEXPXKLTVVVKXXGGXXXGG 324
           K    P    L  G+ R+SK+  + + A      KK P  E        VK  GG   GG
Sbjct: 16  KGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGG 75

Query: 325 XXTVPLKRRXSFYPTQEXIRASSGGRPFSKXVRXXRXXLKIGXVCXLLAGXXAXXXXXXX 504
             TV LK+  + YPT+  ++       FS+  R  R  L  G V  LLAG          
Sbjct: 76  ERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLL 135

Query: 505 XXXXXXXXXXXXPFAFNSCP 564
                       PFA NSCP
Sbjct: 136 KVLASGLLLVTGPFALNSCP 155



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = +3

Query: 543 FCFQFVPXSRIPQXYVIGXSTRXSFGXXKXXKXFNDDYXXXXKXCVXRTVKXKEGXEIFX 722
           F     P  R+ Q YVIG S++   G  K  +  ND Y    K    +  K  E  +IF 
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLK--AKKDKKTGEA-DIFA 205

Query: 723 XKKEXYVPSXXXK 761
            KKE +VP+   K
Sbjct: 206 AKKERFVPNEQRK 218


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 24/77 (31%), Positives = 31/77 (40%)
 Frame = +1

Query: 334 VPLKRRXSFYPTQEXIRASSGGRPFSKXVRXXRXXLKIGXVCXLLAGXXAXXXXXXXXXX 513
           VP+K+  + YPT+  ++       FS+  R  R  L  G V  LLAG             
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119

Query: 514 XXXXXXXXXPFAFNSCP 564
                    PFA NSCP
Sbjct: 120 ASGLLLVTGPFALNSCP 136



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = +3

Query: 543 FCFQFVPXSRIPQXYVIGXSTRXSFGXXKXXKXFNDDYXXXXKXCVXRTVKXKEGXEIFX 722
           F     P  R+ Q YVIG S++   G  K  +  ND Y    K    +  K  E  +IF 
Sbjct: 130 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLK--AKKDKKTGEA-DIFA 186

Query: 723 XKKEXYVPSXXXK 761
            KKE +VP+   K
Sbjct: 187 AKKERFVPNEQRK 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,604,360
Number of Sequences: 53049
Number of extensions: 172666
Number of successful extensions: 222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)