Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P18
(1233 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.008
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.025
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.025
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.73
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.73
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.73
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 3.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 3.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P PP PPPP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 1021 PPPTXF 1038
PPP F
Sbjct: 788 PPPGMF 793
Score = 35.5 bits (78), Expect = 0.078
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP GG PP G G PPPP G PP
Sbjct: 713 PPPPPGLPPITGGP----------PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 1021 PPP 1029
PPP
Sbjct: 763 PPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P PP PPPP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 1021 PPPTXF 1038
PPP F
Sbjct: 788 PPPGMF 793
Score = 35.5 bits (78), Expect = 0.078
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP GG PP G G PPPP G PP
Sbjct: 713 PPPPPGLPPITGGP----------PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 1021 PPP 1029
PPP
Sbjct: 763 PPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P PP PPPP GG PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 1021 PPPTXF 1038
PPP F
Sbjct: 371 PPPGMF 376
Score = 35.5 bits (78), Expect = 0.078
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP GG PP G G PPPP G PP
Sbjct: 296 PPPPPGLPPITGGP----------PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 1021 PPP 1029
PPP
Sbjct: 346 PPP 348
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.025
Identities = 30/100 (30%), Positives = 32/100 (32%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPPP G P PP G G PPPP G G
Sbjct: 282 GMTPRPPPPPS-----SGMWPPPPP----PPPGRTPGPPGMPGMPP-PPPPSRFGPPGMG 331
Query: 1006 GXXPPPPPTXFXXXXXXXXLPQXXKKFFXXGXGXXXXPPP 1125
G PPPPP P ++ G G PPP
Sbjct: 332 GMPPPPPP---GMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 36.3 bits (80), Expect = 0.045
Identities = 25/79 (31%), Positives = 26/79 (32%)
Frame = +1
Query: 796 PXXXTXXXXGGXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPP 975
P T G PPPPP F PG P PP G PPP
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP----PPGMRYPGGM--------PPP 350
Query: 976 PXXXXXXGXGGXXPPPPPT 1032
P G PPPPP+
Sbjct: 351 PPPRYPSAGPGMYPPPPPS 369
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 4/100 (4%)
Frame = +1
Query: 847 PPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXF--GXXXXPPPPXXXXXXGXGGXXPP 1020
PPP G P PP G PPPP G PP
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS---GMWPPPPP 301
Query: 1021 PPP--TXFXXXXXXXXLPQXXKKFFXXGXGXXXXPPPGGV 1134
PPP T P +F G G PPP G+
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.025
Identities = 30/100 (30%), Positives = 32/100 (32%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPPP G P PP G G PPPP G G
Sbjct: 292 GMTPRPPPPPS-----SGMWPPPPP----PPPGRTPGPPGMPGMPP-PPPPSRFGPPGMG 341
Query: 1006 GXXPPPPPTXFXXXXXXXXLPQXXKKFFXXGXGXXXXPPP 1125
G PPPPP P ++ G G PPP
Sbjct: 342 GMPPPPPP---GMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 36.3 bits (80), Expect = 0.045
Identities = 25/79 (31%), Positives = 26/79 (32%)
Frame = +1
Query: 796 PXXXTXXXXGGXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPP 975
P T G PPPPP F PG P PP G PPP
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP----PPGMRYPGGM--------PPP 360
Query: 976 PXXXXXXGXGGXXPPPPPT 1032
P G PPPPP+
Sbjct: 361 PPPRYPSAGPGMYPPPPPS 379
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 4/100 (4%)
Frame = +1
Query: 847 PPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXF--GXXXXPPPPXXXXXXGXGGXXPP 1020
PPP G P PP G PPPP G PP
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS---GMWPPPPP 311
Query: 1021 PPP--TXFXXXXXXXXLPQXXKKFFXXGXGXXXXPPPGGV 1134
PPP T P +F G G PPP G+
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P P G PPPP PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 1021 PPP 1029
PPP
Sbjct: 299 PPP 301
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 895 PXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPPPPPT 1032
P PP G G PPPP PPPPPT
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 277
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP P P P G PPPP G PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 1021 P 1023
P
Sbjct: 315 P 315
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPP P P PP G PPPP G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 1006 GXXPP-----PPP 1029
PP PPP
Sbjct: 311 SLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P P G PPPP PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 1021 PPP 1029
PPP
Sbjct: 320 PPP 322
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 895 PXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPPPPPT 1032
P PP G G PPPP PPPPPT
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 298
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP P P P G PPPP G PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 1021 P 1023
P
Sbjct: 336 P 336
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPP P P PP G PPPP G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 1006 GXXPP-----PPP 1029
PP PPP
Sbjct: 332 SLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G P P G PPPP PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 1021 PPP 1029
PPP
Sbjct: 305 PPP 307
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 895 PXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPPPPPT 1032
P PP G G PPPP PPPPPT
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 283
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP P P P G PPPP G PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 1021 P 1023
P
Sbjct: 321 P 321
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPP P P PP G PPPP G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 1006 GXXPP-----PPP 1029
PP PPP
Sbjct: 317 SLPPPQAGGSPPP 329
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 967 PPPPXXXXXXGXGGXXPPPPP 1029
PPPP G G PPPPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPP 655
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/63 (25%), Positives = 17/63 (26%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
P P + P P PP PPPP G PP
Sbjct: 591 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 650
Query: 1021 PPP 1029
PPP
Sbjct: 651 PPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 967 PPPPXXXXXXGXGGXXPPPPP 1029
PPPP G G PPPPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPP 481
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/63 (25%), Positives = 17/63 (26%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
P P + P P PP PPPP G PP
Sbjct: 417 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 476
Query: 1021 PPP 1029
PPP
Sbjct: 477 PPP 479
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPPP F GG P PP FG PPPP G G
Sbjct: 79 GPGGIPPPPPMF---AGGIPPPPPMMGGIPP------PPPMFGAPPPPPPP-----SGLG 124
Query: 1006 GXXPPPPP 1029
PP P
Sbjct: 125 VAPQPPRP 132
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 967 PPPPXXXXXXGXGGXXPPPPP 1029
PPPP GG PPPPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPP 142
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 969 PPPXXXXXXGXXGXXPPPPTHXXFXGXXXXXXXXXXKKIFXXGXGXXFXPPP 1124
PPP G PPPP H F G F G F PPP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPH--FMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 969 PPPXXXXXXGXXGXXPPPPTHXXFXGXXXXXXXXXXKKIFXXGXGXXFXPPP 1124
PPP G PPPP H F G F G F PPP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPH--FMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +1
Query: 826 GXXXXPPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXG 1005
G PPPPP P PP G PPPP G
Sbjct: 498 GHAPNPPPPPPLLGIA-------PMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGG 550
Query: 1006 GXXPPPPP 1029
PPP P
Sbjct: 551 PPPPPPLP 558
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +2
Query: 827 GXXXXHPPPPXFFXXQGGXXXXXRPXFXXPXKXXXXGXXXPLV-FXXXPPPPXXXXXXGX 1003
G PPPP F QG P F P PPPP G
Sbjct: 736 GFDPNKPPPPMF--QQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGG 793
Query: 1004 GGXXPPPH 1027
G PPPH
Sbjct: 794 HGGPPPPH 801
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +1
Query: 841 PPPPPXFFXXPGGXXXXXPXXXXXPPXXXXXGXXXXFGXXXXPPPPXXXXXXGXGGXXPP 1020
PPPPP G PP G PPPP GG PP
Sbjct: 542 PPPPPI-----AGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPML----GGPPPP 592
Query: 1021 PPP 1029
PPP
Sbjct: 593 PPP 595
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Frame = +1
Query: 895 PXXXXXPPXXXXXGXXXXFGXXXX-PPPPXXXXXXGXGGXXPPPPP 1029
P PP G G PPPP G PPPPP
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP 581
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,657
Number of Sequences: 27780
Number of extensions: 222519
Number of successful extensions: 1126
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -