Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P16
(920 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p pro... 32 0.96
AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like... 32 0.96
AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA... 32 0.96
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 31 1.7
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 31 1.7
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 31 2.9
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 31 2.9
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 31 2.9
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 29 6.8
AE013599-2045|AAF58147.1| 113|Drosophila melanogaster CG8157-PA... 29 9.0
>BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p
protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.96
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG R GGGR GG+ G
Sbjct: 651 GRGGGGGFGGRGGGGRGGGGGFGG----RGGGGRGGGGFGGRGG 690
>AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like
nucleolar protein protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.96
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG R GGGR GG+ G
Sbjct: 651 GRGGGGGFGGRGGGGRGGGGGFGG----RGGGGRGGGGFGGRGG 690
>AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA,
isoform A protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.96
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG R GGGR GG+ G
Sbjct: 651 GRGGGGGFGGRGGGGRGGGGGFGG----RGGGGRGGGGFGGRGG 690
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGK 644
G GGG G GG GG R GGGR GG+
Sbjct: 37 GGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGR 78
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR G + G
Sbjct: 17 GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGG 57
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGK 644
G GGG G GG GG R GGGR GG+
Sbjct: 30 GGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGR 71
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR G + G
Sbjct: 10 GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGG 50
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR GG G
Sbjct: 231 GGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGG 271
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG GGG GG G
Sbjct: 227 GRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGG 270
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR GG G
Sbjct: 193 GGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGG 233
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG GGG GG G
Sbjct: 189 GRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGG 232
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR GG G
Sbjct: 231 GGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGG 271
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G GGGG G GG GG GGG GG G
Sbjct: 227 GRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGG 270
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 528 GGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
GGGG G GG GG GGGR G + G
Sbjct: 10 GGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGG 50
>AE013599-2045|AAF58147.1| 113|Drosophila melanogaster CG8157-PA
protein.
Length = 113
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 519 GEPGGGGXXGSXXGGXXXXXXXGGIXXXRXGGGRXXXXXGGKXG 650
G PGG G G GG GG + G G GG G
Sbjct: 68 GGPGGYGGQGGFGGGPGGFGGQGGFGGGQGGFGEHHRHHGGHHG 111
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,792,880
Number of Sequences: 53049
Number of extensions: 237425
Number of successful extensions: 2321
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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