Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P15
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 171 4e-43
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 171 4e-43
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 171 4e-43
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 119 2e-27
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.9
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 28 7.5
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 28 7.5
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 28 9.9
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 171 bits (417), Expect = 4e-43
Identities = 79/158 (50%), Positives = 96/158 (60%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKWAREHLEX 669
K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV WAREHLE
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEK 203
Query: 670 PIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
+ VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 171 bits (417), Expect = 4e-43
Identities = 79/158 (50%), Positives = 96/158 (60%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKWAREHLEX 669
K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV WAREHLE
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEK 203
Query: 670 PIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
+ VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 171 bits (417), Expect = 4e-43
Identities = 79/158 (50%), Positives = 96/158 (60%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKWAREHLEX 669
K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV WAREHLE
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEK 203
Query: 670 PIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
+ VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 171 bits (417), Expect = 4e-43
Identities = 79/158 (50%), Positives = 96/158 (60%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKWAREHLEX 669
K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV WAREHLE
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEK 203
Query: 670 PIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
+ VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
Score = 91.1 bits (216), Expect = 9e-19
Identities = 41/85 (48%), Positives = 49/85 (57%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHM 564
K IE F K+ +YCS +RV AH M
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 688 VFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
V A + D GVT+G G+ SRW P
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLP 193
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 126 bits (305), Expect = 2e-29
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPKXXPSKPVHLTAFIGYKAGMTHVVRXPDRPGSKI 260
APRHG GF PKK SR +RG +KAFPK SKP+HLTAF+GYKAGMTH+VR D+PGSK+
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKV 67
Query: 261 NKKXXVEAVTIIETPP 308
NKK VEAVTI+ETPP
Sbjct: 68 NKKEVVEAVTIVETPP 83
Score = 91.1 bits (216), Expect = 9e-19
Identities = 41/85 (48%), Positives = 49/85 (57%)
Frame = +1
Query: 310 MVCVGVVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWYXXXXXXXXXXXXXWQXXLGR 489
MV GV GY++TP G RAL T+WAE +SE RRRFY NW WQ G+
Sbjct: 84 MVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGK 143
Query: 490 KSIEKXFKKMXRYCSVVRVXAHXHM 564
K IE F K+ +YCS +RV AH M
Sbjct: 144 KLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 688 VFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
V A + D GVT+G G+ SRW P
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLP 193
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 119 bits (287), Expect = 2e-27
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = +1
Query: 469 WQXXLGRKSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKW 648
WQ G+K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 649 AREHLEXPIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
AREHLE + VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPK 161
APRHG GF PKK SR +RG +KAF K
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 119 bits (287), Expect = 2e-27
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = +1
Query: 469 WQXXLGRKSIEKXFKKMXRYCSVVRVXAHXHMXLLKXRXKXAHIMEXXLXGGTIEDKVKW 648
WQ G+K IE F K+ +YCS +RV AH M +L+ R K AH++E + GGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 649 AREHLEXPIPVDSVFAQDEXXDCXGVTKGXGYXXCPSRWXPXSXP 783
AREHLE + VD+VFAQDE D GVT+G G+ SRW P
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 81 APRHGSXGFXPKKXSRRHRGXVKAFPK 161
APRHG GF PKK SR +RG +KAF K
Sbjct: 8 APRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 325 VVGYIETPHGLRALLTVWAEXMSEXCRRRFYKNWY 429
+ GY++ G+R VW E S+ + KNW+
Sbjct: 209 IAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 287 HHHRDSSEWFVSVLLDTLRPLMD 355
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 287 HHHRDSSEWFVSVLLDTLRPLMD 355
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 287 HHHRDSSEWFVSVLLDTLRPLMD 355
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 287 HHHRDSSEWFVSVLLDTLRPLMD 355
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 287 HHHRDSSEWFVSVLLDTLRPLMD 355
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 312 GLCRCCWIH*DPSWTTRSVDCLGGAYV*XLSTSLLQKLVQMQEEGF 449
G C W + DPS T + DC +Y S S L + V M+ GF
Sbjct: 1170 GHCSVAWANTDPSAATTTCDCSRTSYT-GASCS-LDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,549,192
Number of Sequences: 27780
Number of extensions: 242621
Number of successful extensions: 407
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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