Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_P14
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p pro...    35   0.17 
AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-P...    35   0.17 
AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-P...    35   0.17 

>AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p
           protein.
          Length = 98

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 206 CISXGGXCVRXXACXPXXXSTXSQFLCPNQAHLGVACCY 322
           C+  GG CV    C      T ++ LCP  A  GV CCY
Sbjct: 51  CVMVGGLCVAESDCIEP---TSNKGLCPTSAGEGVECCY 86


>AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-PB,
           isoform B protein.
          Length = 98

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 206 CISXGGXCVRXXACXPXXXSTXSQFLCPNQAHLGVACCY 322
           C+  GG CV    C      T ++ LCP  A  GV CCY
Sbjct: 51  CVMVGGLCVAESDCIEP---TSNKGLCPTSAGEGVECCY 86


>AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-PA,
           isoform A protein.
          Length = 127

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 206 CISXGGXCVRXXACXPXXXSTXSQFLCPNQAHLGVACCY 322
           C+  GG CV    C      T ++ LCP  A  GV CCY
Sbjct: 51  CVMVGGLCVAESDCIEP---TSNKGLCPTSAGEGVECCY 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,219,583
Number of Sequences: 53049
Number of extensions: 194806
Number of successful extensions: 114
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)