Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P12
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 146 2e-35
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 146 2e-35
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 91 7e-19
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 91 7e-19
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 91 7e-19
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 60 2e-09
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 43 3e-04
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 42 4e-04
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 146 bits (353), Expect = 2e-35
Identities = 75/118 (63%), Positives = 77/118 (65%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXK 267
FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L GRTLSDYN K
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
Query: 268 XSXLHLVLXLXGGXXEPSLRILAMKXXCXXXXCRKCYARLHPRATXCRKXKCGXXNXL 441
S LHLVL L GG EPSLR LA K C CRKCYARL PRA+ CRK KCG + L
Sbjct: 64 ESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 146 bits (353), Expect = 2e-35
Identities = 75/118 (63%), Positives = 77/118 (65%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXK 267
FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L GRTLSDYN K
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
Query: 268 XSXLHLVLXLXGGXXEPSLRILAMKXXCXXXXCRKCYARLHPRATXCRKXKCGXXNXL 441
S LHLVL L GG EPSLR LA K C CRKCYARL PRA+ CRK KCG + L
Sbjct: 64 ESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 129
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 130 RTLSDYNIQKESTLHLVLRLRGG 152
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 205
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 206 RTLSDYNIQKESTLHLVLRLRGG 228
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 281
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 282 RTLSDYNIQKESTLHLVLRLRGG 304
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 358 RTLSDYNIQKESTLHLVLRLRGG 380
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/73 (65%), Positives = 48/73 (65%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXK 267
FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L GRTLSDYN K
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
Query: 268 XSXLHLVLXLXGG 306
S LHLVL L GG
Sbjct: 64 ESTLHLVLRLRGG 76
Score = 89.0 bits (211), Expect = 4e-18
Identities = 49/83 (59%), Positives = 49/83 (59%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TL G TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 433
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 434 RTLSDYNIQKESTLHLVLRLRGG 456
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/54 (57%), Positives = 31/54 (57%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAG 219
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 129
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 130 RTLSDYNIQKESTLHLVLRLRGG 152
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 205
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 206 RTLSDYNIQKESTLHLVLRLRGG 228
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 281
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 282 RTLSDYNIQKESTLHLVLRLRGG 304
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 358 RTLSDYNIQKESTLHLVLRLRGG 380
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 509
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 510 RTLSDYNIQKESTLHLVLRLRGG 532
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 585
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 586 RTLSDYNIQKESTLHLVLRLRGG 608
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 661
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 662 RTLSDYNIQKESTLHLVLRLRGG 684
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 737
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 738 RTLSDYNIQKESTLHLVLRLRGG 760
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 813
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 814 RTLSDYNIQKESTLHLVLRLRGG 836
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/73 (65%), Positives = 48/73 (65%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXK 267
FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L GRTLSDYN K
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
Query: 268 XSXLHLVLXLXGG 306
S LHLVL L GG
Sbjct: 64 ESTLHLVLRLRGG 76
Score = 89.0 bits (211), Expect = 4e-18
Identities = 49/83 (59%), Positives = 49/83 (59%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TL G TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 433
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 434 RTLSDYNIQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 129
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 130 RTLSDYNIQKESTLHLVLRLRGG 152
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 205
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 206 RTLSDYNIQKESTLHLVLRLRGG 228
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 281
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 282 RTLSDYNIQKESTLHLVLRLRGG 304
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 357
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 358 RTLSDYNIQKESTLHLVLRLRGG 380
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 374 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 433
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 434 RTLSDYNIQKESTLHLVLRLRGG 456
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 509
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 510 RTLSDYNIQKESTLHLVLRLRGG 532
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 585
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 586 RTLSDYNIQKESTLHLVLRLRGG 608
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 661
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 662 RTLSDYNIQKESTLHLVLRLRGG 684
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 737
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 738 RTLSDYNIQKESTLHLVLRLRGG 760
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/83 (60%), Positives = 50/83 (60%)
Frame = +1
Query: 58 VFXXRXXXXXFVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXG 237
V R FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L G
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 813
Query: 238 RTLSDYNXXKXSXLHLVLXLXGG 306
RTLSDYN K S LHLVL L GG
Sbjct: 814 RTLSDYNIQKQSTLHLVLRLRGG 836
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/73 (65%), Positives = 48/73 (65%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXK 267
FV TLTG TLEV ASDT ENV AKI G PP RLIFAG L GRTLSDYN K
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
Query: 268 XSXLHLVLXLXGG 306
S LHLVL L GG
Sbjct: 64 ESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/72 (41%), Positives = 38/72 (52%)
Frame = +1
Query: 91 VXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXKX 270
V TLTG L++ +D E + K+ G PP RLIFAG + +T +DY
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 271 SXLHLVLXLXGG 306
S LHLVL L GG
Sbjct: 65 SVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = +1
Query: 88 FVXTLTGXPXTLEVXASDTXENVXAKIXXXXGXP 189
FV TLTG TLEV ASDT ENV AKI G P
Sbjct: 4 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 91 VXTLTGXPXTLEVXASDTXENVXAKIXXXXGXPPXXXRLIFAGXXLXXGRTLSDYNXXKX 270
V TL G + + +DT E + K+ G PP RLIF L R L YN
Sbjct: 165 VKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDE 224
Query: 271 SXLHLV 288
+HLV
Sbjct: 225 DIIHLV 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,361,604
Number of Sequences: 27780
Number of extensions: 75662
Number of successful extensions: 91
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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