Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P09
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 157 1e-38
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 155 5e-38
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 152 3e-37
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 129 2e-30
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 128 4e-30
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 98 8e-21
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 93 3e-19
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 79 4e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 64 2e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 32 0.62
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 157 bits (380), Expect = 1e-38
Identities = 83/148 (56%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +2
Query: 296 GXVXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQD-GXRLXGXAAKNQLTX 472
G + GIDLG YSCVGVY NGRV AND G RITPSYVAF+ D G RL G AAKNQLT
Sbjct: 33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTI 92
Query: 473 NPENXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISA 652
NPEN +FDAKRLIGR++ +TV D F PE +SA
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 653 MVLTKMXXXAEAYLGKXVTHAVVTVPAY 736
MVL KM AE+YLGK V +AVVTVPAY
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAGTI+GL V +I EPTA AIAYGL
Sbjct: 188 ATKDAGTIAGLNVVRIINEPTAAAIAYGL 216
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 155 bits (375), Expect = 5e-38
Identities = 82/146 (56%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Frame = +2
Query: 302 VXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQD-GXRLXGXAAKNQLTXNP 478
+ GIDLG YSCVGVY NGRV AND G RITPSYVAF+ D G RL G AAKNQLT NP
Sbjct: 35 IIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Query: 479 ENXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAMV 658
EN +FDAKRLIGR++ +TV D F PE +SAMV
Sbjct: 95 ENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMV 154
Query: 659 LTKMXXXAEAYLGKXVTHAVVTVPAY 736
L KM AE+YLGK V +AVVTVPAY
Sbjct: 155 LVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAGTI+GL V +I EPTA AIAYGL
Sbjct: 188 ATKDAGTIAGLNVVRIINEPTAAAIAYGL 216
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 152 bits (369), Expect = 3e-37
Identities = 82/148 (55%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
Frame = +2
Query: 296 GXVXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQD-GXRLXGXAAKNQLTX 472
G + GIDLG YSCVGV+ NGRV AND G RITPSYVAF+ D G RL G AAKNQLT
Sbjct: 30 GTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTI 89
Query: 473 NPENXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISA 652
NPEN +FDAKRLIGR + +TV D F PE +SA
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 653 MVLTKMXXXAEAYLGKXVTHAVVTVPAY 736
MVLTKM AE+YLG V +AVVTVPAY
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAY 177
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAG+I+GL V +I EPTA AIAYGL
Sbjct: 185 ATKDAGSIAGLNVVRIINEPTAAAIAYGL 213
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 133 bits (322), Expect = 1e-31
Identities = 74/143 (51%), Positives = 80/143 (55%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG YSCVG+Y NG+V AN G + TPSYVAFT D RL G AAK+Q NPEN
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAMVLTK 667
VFDAKRLIGR + TV D F PE ISAMVL K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 668 MXXXAEAYLGKXVTHAVVTVPAY 736
M AE YLG V AV+TVPAY
Sbjct: 127 MKETAETYLGHTVKDAVITVPAY 149
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDA TI+GL +I EPTA A+AYGL
Sbjct: 157 ATKDAATIAGLNAIRIINEPTAAALAYGL 185
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 133 bits (322), Expect = 1e-31
Identities = 74/143 (51%), Positives = 80/143 (55%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG YSCVG+Y NG+V AN G + TPSYVAFT D RL G AAK+Q NPEN
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAMVLTK 667
VFDAKRLIGR + TV D F PE ISAMVL K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 668 MXXXAEAYLGKXVTHAVVTVPAY 736
M AE YLG V AV+TVPAY
Sbjct: 127 MKETAETYLGHTVKDAVITVPAY 149
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDA TI+GL +I EPTA A+AYGL
Sbjct: 157 ATKDAATIAGLNAIRIINEPTAAALAYGL 185
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 133 bits (322), Expect = 1e-31
Identities = 75/144 (52%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG YSCVGV+ +G+V AND G R TPSYVAFT D RL G AAKNQ+ NP N
Sbjct: 8 GIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNT 66
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXG-XXVFAPEXISAMVLT 664
VFDAKRLIGR++ V D G +F PE IS+MVL
Sbjct: 67 VFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLL 126
Query: 665 KMXXXAEAYLGKXVTHAVVTVPAY 736
KM AEA+LG V AVVTVPAY
Sbjct: 127 KMKETAEAFLGTTVKDAVVTVPAY 150
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAG I+GL V +I EPTA AIAYGL
Sbjct: 158 ATKDAGAIAGLNVLRIINEPTAAAIAYGL 186
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 129 bits (312), Expect = 2e-30
Identities = 73/143 (51%), Positives = 80/143 (55%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG YSCVG+Y NG+V AN G + TPSYVAFT D RL G AAK+Q NPEN
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAMVLTK 667
VFDAKRLIGR + +TV D F E ISAMVL K
Sbjct: 67 VFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAMVLQK 126
Query: 668 MXXXAEAYLGKXVTHAVVTVPAY 736
M AEA LG V AV+TVPAY
Sbjct: 127 MKETAEAVLGHSVRDAVITVPAY 149
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDA TI+GL +I EPTA A+AYGL
Sbjct: 157 ATKDAATIAGLNAIRIINEPTAAALAYGL 185
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 128 bits (310), Expect = 4e-30
Identities = 73/144 (50%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG YSCVGV+ +G+V AND G R TPSYVAFT D RL G AAKNQ+ NP N
Sbjct: 8 GIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNT 66
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXG-XXVFAPEXISAMVLT 664
VFDAKRLIGR++ V D G +F PE IS+MVL
Sbjct: 67 VFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLL 126
Query: 665 KMXXXAEAYLGKXVTHAVVTVPAY 736
KM AEA+L V AVVTVP Y
Sbjct: 127 KMKKTAEAFLEPTVKDAVVTVPTY 150
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAG I+GL V +I EPTA AIAYGL
Sbjct: 158 ATKDAGAIAGLNVLRIINEPTAAAIAYGL 186
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 97.9 bits (233), Expect = 8e-21
Identities = 60/147 (40%), Positives = 68/147 (46%)
Frame = +2
Query: 296 GXVXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXN 475
G V GIDLG SCV + N G R TPS VAFT DG RL G AK Q N
Sbjct: 31 GHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
Query: 476 PENXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAM 655
N +F KRLIGR + V D V++P + A
Sbjct: 91 SANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQ---GKVYSPSQVGAF 147
Query: 656 VLTKMXXXAEAYLGKXVTHAVVTVPAY 736
VL KM AE+YLG V +AVVTVPAY
Sbjct: 148 VLMKMKETAESYLGTTVNNAVVTVPAY 174
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAG ISGL V +I EPTA A+AYGL
Sbjct: 182 ATKDAGQISGLNVLRVINEPTAAALAYGL 210
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 92.7 bits (220), Expect = 3e-19
Identities = 58/147 (39%), Positives = 65/147 (44%)
Frame = +2
Query: 296 GXVXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXN 475
G V GIDLG SCV + N G R TPS VAFT DG RL G AK Q N
Sbjct: 31 GHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
Query: 476 PENXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAM 655
N +F KRLIGR + V D + P + A
Sbjct: 91 SANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQ---GKEYPPSQVGAF 147
Query: 656 VLTKMXXXAEAYLGKXVTHAVVTVPAY 736
VL KM AE+YLG V + VVTVPAY
Sbjct: 148 VLMKMKETAESYLGTTVNNPVVTVPAY 174
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGL 842
A KDAG ISGL V +I EPTA A+AYGL
Sbjct: 182 ATKDAGQISGLNVLRVINEPTAAALAYGL 210
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 79.0 bits (186), Expect = 4e-15
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG +SCV Y NG+V N+ G R TPS +A +DG L G AK+ + N
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATNS 62
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXV-FAPEXISAMVLT 664
+FD KR+IGR + + D + F+ +S+++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 665 KMXXXAEAYLGKXVTHAVVTVPAY 736
+ AE LG V AV+TVPAY
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAY 146
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGLK 845
A ++A I+GL V ++ EPTA AIAY LK
Sbjct: 154 ATEEAAEIAGLKVLRILNEPTAAAIAYSLK 183
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 79.0 bits (186), Expect = 4e-15
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +2
Query: 308 GIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
GIDLG +SCV Y NG+V N+ G R TPS +A +DG L G AK+ + N
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATNS 62
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXV-FAPEXISAMVLT 664
+FD KR+IGR + + D + F+ +S+++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 665 KMXXXAEAYLGKXVTHAVVTVPAY 736
+ AE LG V AV+TVPAY
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAY 146
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 756 APKDAGTISGLXVXXLIXEPTAXAIAYGLK 845
A ++A I+GL V ++ EPTA AIAY LK
Sbjct: 154 ATEEAAEIAGLKVLRILNEPTAAAIAYSLK 183
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Frame = +2
Query: 302 VXGIDLGXXYSCVGVYX--NGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXN 475
+ GIDLG YS +G+Y G +D G + PS VAF +G L G A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 476 PENXVFDAKRLIGREWXXQT---VXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXI 646
P+ ++DAKR IGR + + G PE I
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 647 SAMVLTKMXXXAEAYLGKXVTHAVVTVPA 733
++++ + A +LG + V++ PA
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPA 183
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 768 AGTISGLXVXXLIXEPTAXAIAYGL 842
A I+ + V +I EPTA A+AYGL
Sbjct: 196 AAEIAEMEVRRVISEPTAAALAYGL 220
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 56.0 bits (129), Expect = 3e-08
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Frame = +2
Query: 302 VXGIDLGXXYSCVGVYXNGRVXXXANDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPE 481
V G D+G +GV G + ND TP+ V+F R G AA+ +T N +
Sbjct: 3 VLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNIK 61
Query: 482 NXVFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXG-XXVFAPEXISAMV 658
N V + K LIGR++ G F PE + A +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAAL 121
Query: 659 LTKMXXXAEAYLG--KXVTHAVVTVPAY 736
LTK+ E+ L K V+ V+ VP+Y
Sbjct: 122 LTKLRTIVESQLSDVKKVSDCVLAVPSY 149
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 31.9 bits (69), Expect = 0.62
Identities = 33/144 (22%), Positives = 46/144 (31%), Gaps = 2/144 (1%)
Frame = +2
Query: 311 IDLGXXYSCVGVYXNGRVXXXA-NDXGXRITPSYVAFTQDGXRLXGXAAKNQLTXNPENX 487
IDLG + +G+ G A N R TP+ V QDG R AA P
Sbjct: 29 IDLGTQFLKIGIVKPGIPMDIALNTESRRKTPN-VVMIQDGHRTFADAAIGMQVRYPHLV 87
Query: 488 VFDAKRLIGREWXXQTVXXDXXXXXXXXXXXXXXXXXXXXXXXGXXVFAPEXISAMVLTK 667
L+G+ + G + E ++AM+L
Sbjct: 88 HGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMILAN 147
Query: 668 MXXXAEAYL-GKXVTHAVVTVPAY 736
E Y + V+TVP Y
Sbjct: 148 AKKFTEEYAQAAEIKDVVITVPVY 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,034,234
Number of Sequences: 27780
Number of extensions: 115810
Number of successful extensions: 157
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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