Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_P02
(943 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.025
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.31
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.54
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 2.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.025
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Frame = +3
Query: 711 PPPPPGXXXKXXRPXXXG--------GGPPPPRXXKXXXGVXPPXTPPP 833
PPPPP P GGPPPP G PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 710 PPPPPGXXXXXXXAXXXGGGAPPPXXXXXXPGGXPPXDPPP 832
P P P A GG PPP G PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 714 PPPPGXXXKXXRPXXXGGGPPPPRXXKXXXGVXPPXTPPP 833
P P P G PPPP G PP PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 715 PPPRXXXXXXXGPXXXGGGPPPXGXXXTPXGXXPRXPPPP 834
P P P GGPPP G P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 710 PPPPPGXXXXXXXAXXXGGGAPPPXXXXXXPGGXPPXDPPPXXXLXXSPP 859
PPPPP A AP P G PP PPP PP
Sbjct: 732 PPPPPPAVIVPTPAP-----APIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 715 PPPRXXXXXXXGPXXXGGGPPPXGXXXTPXGXXPRXPPPP 834
P P P G PPP G P PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -1
Query: 694 PXXPPLXXGGPPXGPXGDKXXXXGGPPGVXGKXXSPPXXXXKPPPPPXXPAPXFXGGXR 518
P P PP P PPGV G PPPPP P GG R
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG---------PPPPPPPPPAVSAGGSR 791
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 771 PPPPRXXKXXXGVXPPXTPPPXGXXXXPPP 860
PPPP P PPP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.31
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -3
Query: 863 PXGGXXXXXXGGGGXRGXXPXGVFXXPXGGGPPPXXXGPXXFXXXXRGGGGXLXKXPXXP 684
P G GG G G G GGGP GP F G GG L P
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGG--HGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Query: 683 PPFXGG 666
F GG
Sbjct: 259 GGFGGG 264
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 525 PPKKXGAGXXGGGGGFXXXXGGXXXFPXTPGG 620
PP G G GG GG GG F PGG
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Frame = -1
Query: 781 GGGGPPPXXXGRXXXXXXPG-----GGGGXXXKXPXX---PPLXXGGPPXGPXGDKXXXX 626
G GGPPP G G GG G P P GG P G G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 625 GGPPGVXG 602
GGP G G
Sbjct: 256 GGPGGFGG 263
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 528 PKKXGAGXXGGGGGFXXXXGGXXXFPXTPGG 620
P G G G GGG GG F PGG
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = -1
Query: 856 GGXXXXPXG-GGVXGGXTPXXXXXXRGG--GGPPPXXXGRXXXXXXPGGGGGXXXKXPXX 686
GG P G GG G GG GGP G PGG GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 685 PPLXXGGP 662
P GGP
Sbjct: 258 PGGFGGGP 265
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 540 GAGXXGGG-GGFXXXXGGXXXFPXTPGGP 623
G G GGG GGF GG P GGP
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Frame = -1
Query: 694 PXXPPLXX--GGPPXGPXGDKXXXXGGPP----GVXGKXXSPPXXXXKPPPPPXXPAP 539
P PP G PP G PP G PP PPPPP AP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 29.5 bits (63), Expect = 0.72
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Frame = -1
Query: 769 PPPXXXGRXXXXXXPGGGGGXXXKXPXXPP--LXXGGPPXGPXGDKXXXXGG----PPGV 608
PPP GR P G P P L PP P G PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 607 XGKXXSPPXXXXKPPPPPXXPA 542
+PP P PP PA
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPA 472
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -1
Query: 694 PXXPPLXXGGPPXGPXGDKXXXXGGPPGVXGKXXSPPXXXXKPPPPPXXPAP 539
P PP G P P PP G +PP P PPP PAP
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAPAPPP-APAP 482
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = +3
Query: 711 PPPPPGXXXKXXRPXXXGG---GPPPPRXXKXXXGVXPPXTPPPXGXXXXPPP 860
PPPPP P G PPPP G PP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 765 GGPPPPRXXKXXXGVXPPXTPPPXGXXXXPPPG 863
G PPPP G PP PPP PPPG
Sbjct: 7 GNPPPP---PPPPGFEPPSQPPP-----PPPPG 31
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 761 GGGAPPPXXXXXXPGGXPPXDPPP 832
G PPP P PP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 555 GGGGGFXXXXGGXXXFPXTPGGPP 626
G GGGF GG P TP GPP
Sbjct: 6 GRGGGFRGGRGGSR--PFTPSGPP 27
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 592 SPPXXXXKPPPPPXXPAPXF 533
+P +PPPPP PAP +
Sbjct: 348 TPQVQGSRPPPPPPMPAPIY 367
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 619 PPGVXGKXXSPPXXXXKPPPPPXXPA 542
PP S P PPPPP PA
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPA 198
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Frame = +3
Query: 711 PPPPPGXXXKXXRPXXXGGGPPPPRXXKXXXGVXPPXTPPP-----XGXXXXPPP 860
PP P P G PP P+ V PP PP G PPP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/53 (28%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = -1
Query: 685 PPLXXGGPPXG----PXGDKXXXXGGPPGVXGKXXSPPXXXXKPPPPPXXPAP 539
PP+ PP P PP + P K PPPP AP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 771 PPPPRXXKXXXGVXPPXTPPPXGXXXXPPP 860
PPPP K + PP G PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,358,705
Number of Sequences: 5004
Number of extensions: 44829
Number of successful extensions: 271
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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