Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_O23
(1030 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 36 0.039
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.49
07_03_0560 + 19479597-19480667 33 0.49
11_06_0610 - 25449085-25453284 32 0.85
07_03_1636 + 28290642-28291574 31 1.5
06_03_0905 + 25843547-25844314 31 2.0
06_02_0175 - 12624608-12625297 31 2.0
05_03_0126 + 8744030-8744299 30 2.6
06_03_1172 - 28147957-28148274,28149362-28149877 30 3.4
06_01_0178 + 1386981-1387505 30 3.4
02_01_0158 - 1103461-1104186 30 3.4
07_03_0558 + 19461369-19462448 29 4.5
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 6.0
01_03_0202 - 13762042-13762572 29 6.0
07_01_0862 - 7172083-7172931 29 7.9
>12_02_1174 - 26696869-26698191
Length = 440
Score = 36.3 bits (80), Expect = 0.039
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +1
Query: 568 PLXVPPPXXXCLXLAXPMAAXPNLFHQLPPRTXXPPXXRPXPCAPKXPSRXXPLFKSPPX 747
P+ PPP P P + Q PP PP P P P+ PS P+ + P
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQ 180
Query: 748 EDP 756
P
Sbjct: 181 PPP 183
Score = 28.7 bits (61), Expect = 7.9
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Frame = +1
Query: 508 PTRPAXXTPETXXXXLACTXPLXVPPPXXXCLXLAXPMAAXPNLFHQLPPRTXXPP--XX 681
P P P T A P PPP + P P P PP
Sbjct: 222 PPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYW 281
Query: 682 RPXPCAPKXPSRXXPLFKSPP 744
P P P++ P SPP
Sbjct: 282 SPTAVTPPEPTKPKPPPPSPP 302
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -3
Query: 755 GSSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSWWKRLG 630
GSS GG + G R G FG G GR GG G + G
Sbjct: 574 GSSGGGSGRSGFGRSGGFGDSGSGRFGGGFGNSGSGSFGNFG 615
>07_03_0560 + 19479597-19480667
Length = 356
Score = 32.7 bits (71), Expect = 0.49
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = -3
Query: 755 GSSXGGDLKRGNXREGXFGAHG--XGRXXGGXXVRGGSWWKRLGXAAMGXAXXRQXXXGG 582
G GG L G +EG FGA G G GG + GG G G GG
Sbjct: 175 GGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMGG 234
Query: 581 GTXKG 567
G G
Sbjct: 235 GAGGG 239
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.9 bits (69), Expect = 0.85
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +1
Query: 508 PTRPAXXTPETXXXXLACTXPLXVPPPXXXCLXLAXPMAAXPNLFHQLPPR---TXXPPX 678
P P +P L P+ +PPP L P++ P + LPP + PP
Sbjct: 1250 PAAPVILSPPAVKS-LPPPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPA 1308
Query: 679 XRPXPCAPKXPSRXXPLFKSPPXEDP 756
+P P P S P K P P
Sbjct: 1309 VKPLP-PPAPVSLPPPAVKPLPPPVP 1333
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = +1
Query: 493 AVLXXPTRPAXXTPETXXXXLACTXPLXVPPPXXXCLXLAXPMAAXPNLFHQLPPR---T 663
AV P P L P+ +PPP L P++ P LPP +
Sbjct: 1260 AVKSLPPPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPPAPVS 1319
Query: 664 XXPPXXRPXPCAPKXPSRXXP 726
PP +P P P P P
Sbjct: 1320 LPPPAVKPLP--PPVPQVSLP 1338
>07_03_1636 + 28290642-28291574
Length = 310
Score = 31.1 bits (67), Expect = 1.5
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 517 PAXXTPETXXXXLACTXPLXVPPPXXXCLXLAXPMAAXP-NLFHQLPPRTXXPPXXRPXP 693
PA P A P VPPP L P + P L PP+T P +P
Sbjct: 149 PAPPPPPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPPPPQTQTQPLAKPP- 207
Query: 694 CAPKXPSR 717
AP PSR
Sbjct: 208 -APATPSR 214
>06_03_0905 + 25843547-25844314
Length = 255
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/85 (24%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 PTRPAXXTPE--TXXXXLACTXPLXVPPPXXXCLXLAXPMAAXPNLFHQLPPRTXXPPXX 681
P P P+ T + PL PP P+ P + + PP T P
Sbjct: 56 PKNPTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPPVTTPPVVV 115
Query: 682 RPXPCAPKXPSRXXPLFKSPPXEDP 756
P P P P+ PP P
Sbjct: 116 GPPVTYPTPPVTTPPVVVGPPVTYP 140
>06_02_0175 - 12624608-12625297
Length = 229
Score = 30.7 bits (66), Expect = 2.0
Identities = 22/83 (26%), Positives = 26/83 (31%)
Frame = -3
Query: 764 WXXGSSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSWWKRLGXAAMGXAXXRQXXXG 585
W G+ GG G G G G G GG GG + G + G
Sbjct: 87 WGWGTDSGGGGSSGGGGGGGGGGGGGGGGGGGGGGGGGGGRRCWWGCGNGRRRHKGGKEG 146
Query: 584 GGTXKGXVQARXXXXVSGVXXAG 516
GG +G R GV G
Sbjct: 147 GGGGEGRKGIRTEREREGVGGGG 169
>05_03_0126 + 8744030-8744299
Length = 89
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 704 FGAHGXGRXXGGXXVRGGSWWKRLGXAAMGXAXXRQXXXGGG 579
FGA G GG GG W + G AAM ++ G G
Sbjct: 36 FGAWRGGAWLGGTEAGGGGWERERGPAAMEVVGAKEATAGVG 77
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 616 PMAAXPNLFHQLPPRTXXPPXXRPXPCAPKXPSRXXPLFKSPP 744
P + P+++ LPP T PP P P A P L SPP
Sbjct: 14 PPPSPPSVYPFLPPATFIPP---PPPAATAEPYAPPSLIISPP 53
>06_01_0178 + 1386981-1387505
Length = 174
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -3
Query: 755 GSSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSWWKRLGXAAMGXAXXRQXXXGGGT 576
G+ GG G R+G G HG GG G R G G A R G G
Sbjct: 68 GAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGRKGGRGGDGGSGGAGGRGGDGGSGG 127
Query: 575 XKG 567
G
Sbjct: 128 QGG 130
>02_01_0158 - 1103461-1104186
Length = 241
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 755 GSSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSW 645
GS G G G FG+ G G GG GGSW
Sbjct: 75 GSFVKGGAGGGGGGGGGFGSRGGGGSGGGGRSYGGSW 111
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -3
Query: 755 GSSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSWWKRLGXAAMGXAXXRQXXXGGGT 576
G GG L G G FGA G G V GG + G +G G G
Sbjct: 138 GGGGGGGLGGGGGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGLGGGHGGGFGGGAGV 197
Query: 575 XKG 567
G
Sbjct: 198 GGG 200
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 568 PLXVPPPXXXCLXLAXPMAAXPNLFHQLPPRTXXPPXXRPXPCAPKXPSRXXPLFKSPP 744
P PPP P PN +PPR PP P P P P PP
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPP 322
>01_03_0202 - 13762042-13762572
Length = 176
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -3
Query: 752 SSXGGDLKRGNXREGXFGAHGXGRXXGGXXVRGGSWWKRLGXAAMG 615
S GG G+ +G FG G G GG GG WW R + G
Sbjct: 73 SDAGGPFS-GDDGDGFFGPGGGGGGGGG----GGWWWNRGSGSGAG 113
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.7 bits (61), Expect = 7.9
Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Frame = +1
Query: 496 VLXXPTRPAXXTPETXXXXLACTXPLXVPPPXXXCLX-LAXPMAAXPNLFHQ-LPPRTXX 669
V P P P T P +PP L L P P L+ LPP+
Sbjct: 123 VAPAPPPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKP 182
Query: 670 --PPXXRPXPCAPKXPSRXXPLFKSPPXEDP 756
PP P P P+ + P PP + P
Sbjct: 183 LPPPSPPPQPPLPEKENTPLPPLLLPPKKKP 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,669,162
Number of Sequences: 37544
Number of extensions: 182272
Number of successful extensions: 1008
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3024393764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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